RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 EEF2P13639 858 aaKnown RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 HLA-DPA1P20036 260 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 KCNA5P22460 613 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 DEKP35659 375 aaKnown RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 USP8P40818 1118 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 CRIP2P52943 208 aaPredicted RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 CDH8P55286 799 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 OLR1P78380 273 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 NFE2L1Q14494 772 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 KIAA0930Q6ICG6 404 aaPredicted RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 ADAM5Q6NVV9 412 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 CDC73Q6P1J9 531 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 KCTD18Q6PI47 426 aaPredicted RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 C11orf88Q6PI97 169 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 TRAT1Q6PIZ9 186 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 SUSD1Q6UWL2 747 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 SLC36A4Q6YBV0 504 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 RRM2BQ7LG56 351 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 NFE4Q86UQ8 179 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 KMT5CQ86Y97 462 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 TDRPQ86YL5 185 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 ZNF34Q8IZ26 560 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 DSELQ8IZU8 1212 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 POC5Q8NA72 575 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 OR6J1Q8NGC5 347 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 DUSP19Q8WTR2 217 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 KLHL29Q96CT2 875 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 SAAL1Q96ER3 474 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 EPYCQ99645 322 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 MAK16Q9BXY0 300 aaKnown RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 PPP1R3EQ9H7J1 279 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 KAT14Q9H8E8 782 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 HINT3Q9NQE9 182 aaKnown RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 COQ3Q9NZJ6 369 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 EHD2Q9NZN4 543 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 MRPL15Q9P015 296 aaKnown RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 ANAPC5Q9UJX4 755 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 RALYQ9UKM9 306 aaKnown RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 PTRH2Q9Y3E5 179 aaKnown RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 WDR81Q562E7 1941 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 SYNJ2BP-COX16A0A087WUM0 186 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 TEX13CA0A0J9YWL9 993 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 OR2A25A4D2G3 310 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 A8MZ25 164 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 NDC80O14777 642 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 ADAMDEC1O15204 470 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 FGF17O60258 216 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 GGPS1O95749 300 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 PCP11498 1178 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 KRT13P13646 458 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 ITGA2P17301 1181 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 GAP43P17677 238 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 GABRB1P18505 474 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 MAPK3P27361 379 aaPredicted RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 EEF1DP29692 281 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 TMPOP42166 694 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 NRIP1P48552 1158 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 CSE1LP55060 971 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 YBEYP58557 167 aaPredicted RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 PHEXP78562 749 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 MRPS5P82675 430 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 AKAP17AQ02040 695 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 DMP1Q13316 513 aaPredicted RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 CAMK2DQ13557 499 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 CRYMQ14894 314 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 GKAP1Q5VSY0 366 aaPredicted RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 CAVIN1Q6NZI2 390 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 IYDQ6PHW0 289 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 TRMT1LQ7Z2T5 733 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 TBC1D21Q8IYX1 336 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 RNF113BQ8IZP6 322 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 POGLUT1Q8NBL1 392 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 ZNF540Q8NDQ6 660 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 BBS10Q8TAM1 723 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 KRT35Q92764 455 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 PTP4A1Q93096 173 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 EXOC4Q96A65 974 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 ZNF653Q96CK0 615 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 PABPC5Q96DU9 382 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 CDCA5Q96FF9 252 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 WBP1Q96G27 269 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 RBM18Q96H35 190 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 CABS1Q96KC9 395 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 PPP1R13BQ96KQ4 1090 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 FER1L6-AS2Q96M78 137 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 GBP5Q96PP8 586 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 TMEM237Q96Q45 408 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 ZNF334Q9HCZ1 680 aaPredicted RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 INTS10Q9NVR2 710 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 ADPRHL2Q9NX46 363 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 FBXL5Q9UKA1 691 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 INTS6Q9UL03 887 aaKnown RBP3.45□□□□□ -1.86
LEMD3-204ENST00000542032 PADI1Q9ULC6 663 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 NENFQ9UMX5 172 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 DUSP12Q9UNI6 340 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 GAB2Q9UQC2 676 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 SMC3Q9UQE7 1217 aa3.45□□□□□ -1.86
LEMD3-204ENST00000542032 TRPV2Q9Y5S1 764 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms