RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 PRR11Q96HE9 360 aaPredicted RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 SORT1Q99523 831 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 TFB2MQ9H5Q4 396 aaKnown RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 PREBQ9HCU5 417 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 TRPM6Q9BX84 2022 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 TRIOO75962 3097 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 GYG2O15488 501 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 HNRNPRO43390 633 aaKnown RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 TSPAN6O43657 245 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 AP1G1O43747 822 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 H2AFYO75367 372 aaKnown RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 RNASEH2AO75792 299 aaKnown RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 IL9P15248 144 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 ATP5F1P24539 256 aaPredicted RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 CCR10P46092 362 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 PRKAA2P54646 552 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 TMED1Q13445 227 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 ZNF765Q7L2R6 523 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 TMPRSS6Q8IU80 811 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 DDHD1Q8NEL9 900 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 RHEBL1Q8TAI7 183 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 GANCQ8TET4 914 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 BTN2A2Q8WVV5 523 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 INPP5DQ92835 1189 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 GLYATL1Q969I3 302 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 ITFG2Q969R8 447 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 LINGO1Q96FE5 620 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 VPS35Q96QK1 796 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 PANX3Q96QZ0 392 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 MARCOQ9UEW3 520 aaPredicted RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 SERGEFQ9UGK8 458 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 MBD1Q9UIS9 605 aaPredicted RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 MTX2O75431 263 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 PCDH8O95206 1070 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 TGDSO95455 350 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 TSPAN12O95859 305 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 DNTTP04053 509 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 OR56A5P0C7T3 313 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 TROVE2P10155 538 aaKnown RBP eCLIP8.56□□□□□ -1.04
THBS3-210ENST00000541576 KITP10721 976 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 ATP1B2P14415 290 aaPredicted RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 MSH3P20585 1137 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 COL9A1P20849 921 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 CD72P21854 359 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 NAGLUP54802 743 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 TAS2R38P59533 333 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 ABCE1P61221 599 aaKnown RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 BTKQ06187 659 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 ASPHQ12797 758 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 CCINQ13939 588 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 OR4D1Q15615 310 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 PUS10Q3MIT2 529 aaKnown RBP8.56□□□□□ -1.04
THBS3-210ENST00000541576 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.56□□□□□ -1.04
THBS3-210ENST00000541576 LDLRAP1Q5SW96 308 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 TEX9Q8N6V9 391 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 RPLP0P6Q8NHW5 317 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 EEF1AKMT1Q8WVE0 214 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 KIAA1191Q96A73 305 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 CCDC126Q96EE4 140 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 CLPTM1LQ96KA5 538 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 FBXL12Q9NXK8 326 aa8.56□□□□□ -1.04
THBS3-210ENST00000541576 SHISA7A6NL88 538 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 F8W8V4 182 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 GNAZP19086 355 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 RAET1GQ6H3X3 334 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 ASRGL1Q7L266 308 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 DET1Q7L5Y6 550 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 CRLF3Q8IUI8 442 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 ZBTB2Q8N680 514 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 FAM81AQ8TBF8 368 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 STAG3L4Q8TBR4 150 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 TRIM55Q9BYV6 548 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 SHCBP1LQ9BZQ2 653 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 SLC6A17Q9H1V8 727 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 CYP4F12Q9HCS2 524 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 PNPOQ9NVS9 261 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 STOML1Q9UBI4 398 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 NUMA1Q14980 2115 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 TMEM114B3SHH9 223 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 LOC730098B7Z3J9 87 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 BTN3A1O00481 513 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 INPP4BO15327 924 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 MAGEC1O60732 1142 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 GPR1P46091 355 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 RGS4P49798 205 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 TFF2Q03403 129 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 DPTQ07507 201 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 TTLL9Q3SXZ7 439 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 EOGTQ5NDL2 527 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 PHYKPLQ8IUZ5 450 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 DRAXINQ8NBI3 349 aaPredicted RBP8.55□□□□□ -1.04
THBS3-210ENST00000541576 PPP4R1Q8TF05 950 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 WDR60Q8WVS4 1066 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 NRG4Q8WWG1 115 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 EXT2Q93063 718 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 DDX18Q9NVP1 670 aaKnown RBP8.55□□□□□ -1.04
THBS3-210ENST00000541576 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.55□□□□□ -1.04
THBS3-210ENST00000541576 GALNT8Q9NY28 637 aa8.55□□□□□ -1.04
THBS3-210ENST00000541576 NDRG2Q9UN36 371 aaKnown RBP8.55□□□□□ -1.04
THBS3-210ENST00000541576 DNAJC16Q9Y2G8 782 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms