RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 P3H4Q92791 437 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 FCRL5Q96RD9 977 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.47■■□□□ 1.35
LEMD3-203ENST00000541171 FAM8A1Q9UBU6 413 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 PKP3Q9Y446 797 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 UBA6A0AVT1 1052 aaPredicted RBP23.46■■□□□ 1.35
LEMD3-203ENST00000541171 EPOP01588 193 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 AKT1P31749 480 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 MLLT10P55197 1068 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 ACY1Q03154 408 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 ITGA9Q13797 1035 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 DNTTIP2Q5QJE6 756 aaKnown RBP23.46■■□□□ 1.35
LEMD3-203ENST00000541171 FNBP1LQ5T0N5 605 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 DTX3LQ8TDB6 740 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 NAT14Q8WUY8 206 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 ACTL8Q9H568 366 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 HRASLS2Q9NWW9 162 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 SEMA5BQ9P283 1151 aa23.46■■□□□ 1.35
LEMD3-203ENST00000541171 DNMT3AQ9Y6K1 912 aaPredicted RBP23.46■■□□□ 1.35
LEMD3-203ENST00000541171 MFAP3LO75121 409 aa23.45■■□□□ 1.34
LEMD3-203ENST00000541171 DNAJB5O75953 348 aa23.45■■□□□ 1.34
LEMD3-203ENST00000541171 MTHFD1P11586 935 aaKnown RBP23.45■■□□□ 1.34
LEMD3-203ENST00000541171 MSH3P20585 1137 aa23.45■■□□□ 1.34
LEMD3-203ENST00000541171 PMS2P54278 862 aa23.45■■□□□ 1.34
LEMD3-203ENST00000541171 RPS18P62269 152 aaKnown RBP23.45■■□□□ 1.34
LEMD3-203ENST00000541171 TAZQ16635 292 aa23.45■■□□□ 1.34
LEMD3-203ENST00000541171 DUS1LQ6P1R4 473 aaKnown RBP23.45■■□□□ 1.34
LEMD3-203ENST00000541171 MIB2Q96AX9 1013 aa23.45■■□□□ 1.34
LEMD3-203ENST00000541171 INSM2Q96T92 566 aaPredicted RBP23.45■■□□□ 1.34
LEMD3-203ENST00000541171 WWP1Q9H0M0 922 aa23.45■■□□□ 1.34
LEMD3-203ENST00000541171 FGF21Q9NSA1 209 aa23.45■■□□□ 1.34
LEMD3-203ENST00000541171 RSPH14Q9UHP6 348 aa23.45■■□□□ 1.34
LEMD3-203ENST00000541171 C21orf140B9A014 251 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 GAPDHSO14556 408 aaPredicted RBP23.44■■□□□ 1.34
LEMD3-203ENST00000541171 STX7O15400 261 aaKnown RBP23.44■■□□□ 1.34
LEMD3-203ENST00000541171 HLA-DPA1P20036 260 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 MPP3Q13368 585 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 LONRF2Q1L5Z9 754 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 METRNLQ641Q3 311 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 ZNF398Q8TD17 642 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 ZNF514Q96K75 400 aaPredicted RBP23.44■■□□□ 1.34
LEMD3-203ENST00000541171 C12orf66Q96MD2 445 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 FCRL4Q96PJ5 515 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 FSD1LQ9BXM9 530 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 TRIM55Q9BYV6 548 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 GOLPH3Q9H4A6 298 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 LRRK2Q5S007 2527 aa23.44■■□□□ 1.34
LEMD3-203ENST00000541171 OR5K3A6NET4 321 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 AGTP01019 485 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 PDGFAP04085 211 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 ARCN1P48444 511 aaKnown RBP23.43■■□□□ 1.34
LEMD3-203ENST00000541171 SEMA5AQ13591 1074 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 SKOR2Q2VWA4 1001 aaPredicted RBP23.43■■□□□ 1.34
LEMD3-203ENST00000541171 ARMC6Q6NXE6 501 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 BPHLQ86WA6 291 aaPredicted RBP23.43■■□□□ 1.34
LEMD3-203ENST00000541171 ATCAYQ86WG3 371 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 OOSP2Q86WS3 158 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 CCDC50Q8IVM0 306 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 VSTM4Q8IW00 320 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 VAT1Q99536 393 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 C10orf88Q9H8K7 445 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 ALG6Q9Y672 507 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 ARL5AQ9Y689 179 aa23.43■■□□□ 1.34
LEMD3-203ENST00000541171 RELNP78509 3460 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 OR6C74A6NCV1 312 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 TLCD2A6NGC4 264 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 PSTPIP1O43586 416 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 RECKO95980 971 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 RPS15P62841 145 aaKnown RBP23.42■■□□□ 1.34
LEMD3-203ENST00000541171 HSD11B2P80365 405 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 PDE1BQ01064 536 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 GPR19Q15760 415 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 TFDP3Q5H9I0 405 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 FBXO38Q6PIJ6 1188 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 KMT5CQ86Y97 462 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 TMEM126BQ8IUX1 230 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 FAM26EQ8N5C1 309 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 SPDYE1Q8NFV5 336 aaPredicted RBP23.42■■□□□ 1.34
LEMD3-203ENST00000541171 MR1Q95460 341 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 QKIQ96PU8 341 aaKnown RBP eCLIP23.42■■□□□ 1.343e-14■■■■■ 63.7
LEMD3-203ENST00000541171 CD180Q99467 661 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 FICDQ9BVA6 458 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 INTUQ9ULD6 942 aa23.42■■□□□ 1.34
LEMD3-203ENST00000541171 hCG_1818297A0A087WSY0 165 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 CLEC18AA5D8T8 446 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 MGAT4DA6NG13 374 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 DDX3YO15523 660 aaKnown RBP23.41■■□□□ 1.34
LEMD3-203ENST00000541171 SCRG1O75711 98 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 ZRANB2O95218 330 aaKnown RBP eCLIP23.41■■□□□ 1.34
LEMD3-203ENST00000541171 PRAMEF1O95521 474 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 POLBP06746 335 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 PTPN4P29074 926 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 CHAF1BQ13112 559 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 GSE1Q14687 1217 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 TCEAL1Q15170 157 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 CLEC18BQ6UXF7 455 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 APLFQ8IW19 511 aaPredicted RBP23.41■■□□□ 1.34
LEMD3-203ENST00000541171 D2HGDHQ8N465 521 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 CLEC18CQ8NCF0 446 aa23.41■■□□□ 1.34
LEMD3-203ENST00000541171 PPM1MQ96MI6 270 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms