RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 LAMB2P55268 1798 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 ANKRD31Q8N7Z5 1873 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 RFXANKO14593 260 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 TYROBPO43914 113 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 DNAJA2O60884 412 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 DLDP09622 509 aaKnown RBP9.42□□□□□ -0.9
TTC39C-203ENST00000540918 FASP25445 335 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 CST5P28325 142 aaPredicted RBP9.42□□□□□ -0.9
TTC39C-203ENST00000540918 GNPDA1P46926 289 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 PRKAA2P54646 552 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 ADAM17P78536 824 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 PCLAFQ15004 111 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 SNX20Q7Z614 316 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 TAF8Q7Z7C8 310 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 P3H2Q8IVL5 708 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 ARHGAP12Q8IWW6 846 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 C10orf82Q8WW14 230 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 CLP1Q92989 425 aaKnown RBP9.42□□□□□ -0.9
TTC39C-203ENST00000540918 C1orf74Q96LT6 269 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 KIFC1Q9BW19 673 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 KLHL4Q9C0H6 718 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 STN1Q9H668 368 aaKnown RBP9.42□□□□□ -0.9
TTC39C-203ENST00000540918 ARMC7Q9H6L4 198 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 YY1AP1Q9H869 796 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 PHPT1Q9NRX4 125 aaPredicted RBP9.42□□□□□ -0.9
TTC39C-203ENST00000540918 OXSMQ9NWU1 459 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 CNOT1A5YKK6 2376 aaKnown RBP9.42□□□□□ -0.9
TTC39C-203ENST00000540918 SEC16AO15027 2179 aa9.42□□□□□ -0.9
TTC39C-203ENST00000540918 TULP3O75386 442 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 CCR4P51679 360 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 STC1P52823 247 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 MTPNP58546 118 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 DSC1Q08554 894 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 MTX3Q5HYI7 312 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 SAMD4BQ5PRF9 694 aaKnown RBP9.41□□□□□ -0.9
TTC39C-203ENST00000540918 SPESP1Q6UW49 350 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 MYCBPQ99417 103 aaPredicted RBP9.41□□□□□ -0.9
TTC39C-203ENST00000540918 GPR22Q99680 433 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 DNAJC11Q9NVH1 559 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 SIRPGQ9P1W8 387 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 MAST2Q6P0Q8 1798 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 COL11A2P13942 1736 aaPredicted RBP9.41□□□□□ -0.9
TTC39C-203ENST00000540918 POP7O75817 140 aaKnown RBP9.41□□□□□ -0.9
TTC39C-203ENST00000540918 SSR2P43308 183 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 DHCR24Q15392 516 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
TTC39C-203ENST00000540918 TMEM132CQ8N3T6 1108 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 B4GALNT2Q8NHY0 566 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 ANKRD49Q8WVL7 239 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 WBP2Q969T9 261 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 EXOSC8Q96B26 276 aaKnown RBP9.41□□□□□ -0.9
TTC39C-203ENST00000540918 GRIP2Q9C0E4 1043 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 XKR8Q9H6D3 395 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 LRTM1Q9HBL6 345 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 SPAG4Q9NPE6 437 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 CTPS2Q9NRF8 586 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 PCDHB1Q9Y5F3 818 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 C16orf96A6NNT2 1141 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 MUSKO15146 869 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 OR1F1O43749 312 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 TM7SF2O76062 418 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 IFNA16P05015 189 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 HSMCR30P0CW71 290 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 CENPAP49450 140 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 SPIDRQ14159 915 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 FAM174BQ3ZCQ3 159 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 ACSBG2Q5FVE4 666 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 NADSYN1Q6IA69 706 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 FAM180BQ6P0A1 224 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 GAREM2Q75VX8 874 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 C17orf64Q86WR6 236 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 PIANPQ8IYJ0 282 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 SLC45A3Q96JT2 553 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 CIB1Q99828 191 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 IMPAD1Q9NX62 359 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 MTF2Q9Y483 593 aaPredicted RBP9.41□□□□□ -0.9
TTC39C-203ENST00000540918 AP4S1Q9Y587 144 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 BACE2Q9Y5Z0 518 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 CARNS1A5YM72 827 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 KRT87PA6NCN2 255 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 PPP6CO00743 305 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 TP73O15350 636 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 HOXB2P14652 356 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 CEBPBP17676 345 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 IL5RAQ01344 420 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 RING1Q06587 406 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 SLC20A2Q08357 652 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 MGAT3Q09327 533 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 ELP6Q0PNE2 266 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 SCAPQ12770 1279 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 TMED1Q13445 227 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 SQLEQ14534 574 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 ATP13A5Q4VNC0 1218 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 CAPN13Q6MZZ7 669 aaPredicted RBP9.41□□□□□ -0.9
TTC39C-203ENST00000540918 TPRG1Q6ZUI0 275 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 GALNT13Q8IUC8 556 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 RP9Q8TA86 221 aaKnown RBP9.41□□□□□ -0.9
TTC39C-203ENST00000540918 RDH11Q8TC12 318 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 DOK4Q8TEW6 326 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 NRBF2Q96F24 287 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms