RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 DTX3LQ8TDB6 740 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 AGAP11Q8TF27 550 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 GUCD1Q96NT3 240 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 CATSPER2Q96P56 530 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 GAS2L1Q99501 681 aaPredicted RBP12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 TMEM79Q9BSE2 394 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 ZSCAN5AQ9BUG6 496 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 C1QTNF3Q9BXJ4 246 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 ZMYND15Q9H091 742 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 TUBB1Q9H4B7 451 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 KCTD5Q9NXV2 234 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 NUDT4Q9NZJ9 180 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 FAM8A1Q9UBU6 413 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 CD207Q9UJ71 328 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 PCYT1BQ9Y5K3 369 aaPredicted RBP12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 F5P12259 2224 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 SHISA7A6NL88 538 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 SYCE1LA8MT33 242 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 MEI4A8MW99 385 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 SPECC1L-ADORA2AF8WAN1 911 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 H0Y858 1186 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 STX16-NPEPL1H3BU86 382 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 PSMD11O00231 422 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 E2F3O00716 465 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 STX16O14662 325 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 FFAR2O15552 330 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 DCXO43602 365 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 ADAM23O75077 832 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 RASSF9O75901 435 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 OR56A5P0C7T3 313 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 COPAP53621 1224 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 HSPA14Q0VDF9 509 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 GALNT1Q10472 559 aaPredicted RBP12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 CAMK2GQ13555 558 aaPredicted RBP12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 BOP1Q14137 746 aaKnown RBP12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 PON2Q15165 354 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 CST6Q15828 149 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 TMEM196Q5HYL7 178 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 AGBL4Q5VU57 503 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 XKR5Q6UX68 686 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 RAB44Q7Z6P3 723 aaPredicted RBP12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 NRSN1Q8IZ57 195 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 NUS1Q96E22 293 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 VPS35Q96QK1 796 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 HDAC8Q9BY41 377 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 RSPH9Q9H1X1 276 aaPredicted RBP12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 MEAF6Q9HAF1 191 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 HEBP1Q9NRV9 189 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 VTI1BQ9UEU0 232 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 LNPEPQ9UIQ6 1025 aa12.06□□□□□ -0.48
AP003559.1-201ENST00000540906 TMEM265A0A087WTH1 108 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 RGSL1A5PLK6 1076 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 C1QTNF3-AMACRE9PGA6 284 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 TSPAN6O43657 245 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 SNX2O60749 519 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 FOSL2P15408 326 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 AOC1P19801 751 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 MSH3P20585 1137 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 GDF5P43026 501 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 HSPA7P48741 367 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 RGS4P49798 205 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 HK2P52789 917 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 INHBCP55103 352 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 ELF3P78545 371 aaPredicted RBP12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 ELP6Q0PNE2 266 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 SKIV2LQ15477 1246 aaKnown RBP12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 TCHHL1Q5QJ38 904 aaPredicted RBP12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 KANK2Q63ZY3 851 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 ANKS6Q68DC2 871 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 NXNQ6DKJ4 435 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 CYP2U1Q7Z449 544 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 ADAMTSL2Q86TH1 951 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 SNX31Q8N9S9 440 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 OR52B6Q8NGF0 335 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 CSGALNACT1Q8TDX6 532 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 DCUN1D1Q96GG9 259 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 PPP1R16AQ96I34 528 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 CDK15Q96Q40 435 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 PANX3Q96QZ0 392 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 TRMOQ9BU70 441 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 TBC1D10AQ9BXI6 508 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 CADM1Q9BY67 442 aaKnown RBP12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 FAM126AQ9BYI3 521 aaPredicted RBP12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 MKRN2Q9H000 416 aaKnown RBP12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 EML4Q9HC35 981 aaKnown RBP12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 TAS2R1Q9NYW7 299 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 GULP1Q9UBP9 304 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 TAGLN3Q9UI15 199 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 PTBP2Q9UKA9 531 aaKnown RBP12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 BTRCQ9Y297 605 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 OARD1Q9Y530 152 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 TIMM22Q9Y584 194 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 DNAJC15Q9Y5T4 150 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 NUMA1Q14980 2115 aa12.05□□□□□ -0.48
AP003559.1-201ENST00000540906 ATP6AP2A0A1C7CYW4 349 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 A0A1W2PP55 124 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 NARSO43776 548 aaKnown RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 LZTS3O60299 673 aaPredicted RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 MAGEC1O60732 1142 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms