RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 PCDHB1Q9Y5F3 818 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 TP53BP1Q12888 1972 aaPredicted RBP15.22■□□□□ 0.03
DDB1-218ENST00000540784 ASCC3Q8N3C0 2202 aaKnown RBP15.21■□□□□ 0.03
DDB1-218ENST00000540784 SPAARA0A1B0GVQ0 90 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 PRR19A6NJB7 356 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 H3BMM5 538 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 GIPC1O14908 333 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 NOBOXO60393 691 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 HAUS5O94927 633 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 ESR1P03372 595 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 F3P13726 295 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 HALP42357 657 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 SLC1A2P43004 574 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 LEPRP48357 1165 aaKnown RBP15.21■□□□□ 0.03
DDB1-218ENST00000540784 ADARP55265 1226 aaKnown RBP15.21■□□□□ 0.03
DDB1-218ENST00000540784 SIM1P81133 766 aaPredicted RBP15.21■□□□□ 0.03
DDB1-218ENST00000540784 DNAJC3Q13217 504 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 SEPT7Q16181 437 aaKnown RBP15.21■□□□□ 0.03
DDB1-218ENST00000540784 ZNF789Q5FWF6 425 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 KIAA0408Q6ZU52 694 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 CYS1Q717R9 158 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 SFTPA2Q8IWL1 248 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 NAGSQ8N159 534 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 ARL14Q8N4G2 192 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 KYQ8NBH2 561 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 C2CD4AQ8NCU7 369 aaPredicted RBP15.21■□□□□ 0.03
DDB1-218ENST00000540784 OR6C4Q8NGE1 309 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 HM13Q8TCT9 377 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 MAPK15Q8TD08 544 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 ELMO1Q92556 727 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 PANX3Q96QZ0 392 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 CCDC68Q9H2F9 335 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 LRRC4CQ9HCJ2 640 aa15.21■□□□□ 0.03
DDB1-218ENST00000540784 BPTFQ12830 3046 aa15.21■□□□□ 0.02
DDB1-218ENST00000540784 PLXNB3Q9ULL4 1909 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 LY6G6EA0A0G2JKS1 128 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 KIR2DS5A0A0G2JLQ3 304 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 A0A0G2JNG1 304 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 EME2A4GXA9 379 aaPredicted RBP15.2■□□□□ 0.02
DDB1-218ENST00000540784 A6NCN8 305 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 IQCF5A8MTL0 148 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 KIR2DS3K7RE56 304 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 KPNA5O15131 536 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 SPAG6O75602 509 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 AHSGP02765 367 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 PKMP14618 531 aaKnown RBP15.2■□□□□ 0.02
DDB1-218ENST00000540784 ITGB6P18564 788 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 CHRM3P20309 590 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 ACP1P24666 158 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 ECHS1P30084 290 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 GPX6P59796 221 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 MPP1Q00013 466 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 KIR2DS5Q14953 304 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 KYNUQ16719 465 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 CCDC157Q569K6 752 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 EFL1Q7Z2Z2 1120 aaKnown RBP15.2■□□□□ 0.02
DDB1-218ENST00000540784 C17orf82Q86X59 251 aaPredicted RBP15.2■□□□□ 0.02
DDB1-218ENST00000540784 RELL1Q8IUW5 271 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 CNTN4Q8IWV2 1026 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 KRT222Q8N1A0 295 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 PATE1Q8WXA2 126 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 BIRC8Q96P09 236 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 ZFATQ9P243 1243 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 LRIT1Q9P2V4 623 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 PSMD13Q9UNM6 376 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 APOBEC2Q9Y235 224 aaKnown RBP15.2■□□□□ 0.02
DDB1-218ENST00000540784 U3KQA8 63 aa15.2■□□□□ 0.02
DDB1-218ENST00000540784 LRP4O75096 1905 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 RHPN2P1A8MT19 583 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 LIN7AO14910 233 aaPredicted RBP15.19■□□□□ 0.02
DDB1-218ENST00000540784 GLB1P16278 677 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 XRCC1P18887 633 aaPredicted RBP15.19■□□□□ 0.02
DDB1-218ENST00000540784 CCR7P32248 378 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 MAZP56270 477 aaKnown RBP15.19■□□□□ 0.02
DDB1-218ENST00000540784 PLOD1Q02809 727 aaPredicted RBP15.19■□□□□ 0.02
DDB1-218ENST00000540784 RPA4Q13156 261 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 ILKQ13418 452 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 SLMAPQ14BN4 828 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 CLCA4Q14CN2 919 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 BRD3Q15059 726 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 SYTL3Q4VX76 610 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 GUSBP11Q6P575 273 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 CNSTQ6PJW8 725 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 SLC9B2Q86UD5 537 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 SFRP1Q8N474 314 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 EIF1ADQ8N9N8 165 aaKnown RBP15.19■□□□□ 0.02
DDB1-218ENST00000540784 IFI44Q8TCB0 444 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 ASZ1Q8WWH4 475 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 UBXN4Q92575 508 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 CDKL2Q92772 493 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 NAT6Q93015 286 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 WWP1Q9H0M0 922 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 COG4Q9H9E3 785 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 NSMCE4AQ9NXX6 385 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 SCHIP1Q9P0W5 487 aaPredicted RBP15.19■□□□□ 0.02
DDB1-218ENST00000540784 WDR37Q9Y2I8 494 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 COMMD10Q9Y6G5 202 aa15.19■□□□□ 0.02
DDB1-218ENST00000540784 TCRBV9S1A1TA0A576 114 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 NUDT21O43809 227 aaKnown RBP15.18■□□□□ 0.02
DDB1-218ENST00000540784 APOA4P06727 396 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms