RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 TRAPPC11Q7Z392 1133 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 ATG9AQ7Z3C6 839 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 ADGRE4PQ86SQ3 457 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 SYVN1Q86TM6 617 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 EXOC3L1Q86VI1 746 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 DDIASQ8IXT1 998 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 ZNF679Q8IYX0 411 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CFAP52Q8N1V2 620 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 BBS5Q8N3I7 341 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 GUF1Q8N442 669 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 FAM184AQ8NB25 1140 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 PSD4Q8NDX1 1056 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 OR52E1Q8NGJ3 308 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 OR8K5Q8NH50 307 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 SUN3Q8TAQ9 357 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 SLC35B2Q8TB61 432 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 MIPOL1Q8TD10 442 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 LRRC8CQ8TDW0 803 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 NSMCE1Q8WV22 266 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 TEKT4Q8WW24 435 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 GLMPQ8WWB7 406 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 PSPC1Q8WXF1 523 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 ST8SIA2Q92186 375 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 RAPGEF5Q92565 580 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CNOT9Q92600 299 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 ARHGAP45Q92619 1136 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 DNASE1L2Q92874 299 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 NACC2Q96BF6 587 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 MMABQ96EY8 250 aaPredicted RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 C14orf79Q96F83 325 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 HES6Q96HZ4 224 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 PIWIL1Q96J94 861 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 RMDN2Q96LZ7 410 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 RAD9AQ99638 391 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 HNRNPABQ99729 332 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 NPAS1Q99742 590 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 BCL7BQ9BQE9 202 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 PTDSS2Q9BVG9 487 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 TLR10Q9BXR5 811 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CTDSP1Q9GZU7 261 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CLPBQ9H078 707 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 KCNH6Q9H252 994 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 LRRC40Q9H9A6 602 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 THAP1Q9NVV9 213 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 DLGAP2Q9P1A6 1054 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 STEAP1Q9UHE8 339 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 ATP6V1HQ9UI12 483 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 UBE2J1Q9Y385 318 aaPredicted RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 DDX49Q9Y6V7 483 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CACNA1HO95180 2353 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 FREM2Q5SZK8 3169 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 PPLO60437 1756 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 INSRP06213 1382 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 DOT1LQ8TEK3 1739 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 ACEP12821 1306 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 FAM230AA0A1W2PPH8 454 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 ELOVL7A1L3X0 281 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 ZSCAN5BA6NJL1 495 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 LRRC53A6NM62 1247 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 F8WDY8 70 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 M0QYT0 321 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 EBAG9O00559 213 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 SOCS6O14544 535 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 CLDN3O15551 220 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 HCRTR2O43614 444 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 TRIAP1O43715 76 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 CACNG3O60359 315 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 ZC3H11AO75152 810 aaKnown RBP eCLIP3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 NDUFS3O75489 264 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 ZNF821O75541 412 aaPredicted RBP3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 IDH1O75874 414 aaKnown RBP3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 LMNAP02545 664 aaKnown RBP3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 THRBP10828 461 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 AREGP15514 252 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 ITIH1P19827 911 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 ACHEP22303 614 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 MMP8P22894 467 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 DNAJB1P25685 340 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 CD27P26842 260 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 PSMA5P28066 241 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 PTPN4P29074 926 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 ALDH4A1P30038 563 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 TAGLN2P37802 199 aaKnown RBP3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 USP8P40818 1118 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 EPS15P42566 896 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 CLCNKAP51800 687 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 DGKQP52824 942 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 METAP1P53582 386 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 MVDP53602 400 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 PTTG1IPP53801 180 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 PDE1AP54750 535 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 KRTAP10-9P60411 292 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 ABRQ12979 859 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 TRDNQ13061 729 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 BFSP2Q13515 415 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 NEDD9Q14511 834 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 GRM7Q14831 915 aa3.79□□□□□ -1.8
AC055720.1-201ENST00000539552 CYP2A13Q16696 494 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms