RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 TIMM29Q9BSF4 260 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 PPCSQ9HAB8 311 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 KLC4Q9NSK0 619 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 TOR4AQ9NXH8 423 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 TAAR2Q9P1P5 351 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 SPASTQ9UBP0 616 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 CDYLQ9Y232 598 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 CRYL1Q9Y2S2 319 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 PIEZO1Q92508 2521 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 WDFY3Q8IZQ1 3526 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 PRAMEF33A0A0G2JMD5 474 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 H3BM21 787 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 RASGRF2O14827 1237 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 YKT6O15498 198 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 NIPSNAP2O75323 286 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 SHBGP04278 402 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 MYZAPP0CAP1 466 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 PAMP19021 973 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 RPS3P23396 243 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC42-202ENST00000539522 CCR7P32248 378 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 TTPAP49638 278 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 BLKP51451 505 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 CLCNKAP51800 687 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 ATXN3P54252 364 aaPredicted RBP12.76□□□□□ -0.37
CCDC42-202ENST00000539522 ADARP55265 1226 aaKnown RBP12.76□□□□□ -0.37
CCDC42-202ENST00000539522 ARHGAP8P85298 464 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 ZNF844Q08AG5 666 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 RBM20Q5T481 1227 aaKnown RBP12.76□□□□□ -0.37
CCDC42-202ENST00000539522 LYPLAL1Q5VWZ2 237 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 VRK3Q8IV63 474 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 NAXDQ8IW45 347 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 SLC35F3Q8IY50 421 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 FSTL5Q8N475 847 aaPredicted RBP12.76□□□□□ -0.37
CCDC42-202ENST00000539522 OR2L2Q8NH16 312 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 TCF12Q99081 682 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 PRDM8Q9NQV8 689 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 NLGN3Q9NZ94 848 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 OGFRQ9NZT2 677 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 FETUBQ9UGM5 382 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 RABGEF1Q9UJ41 708 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 DNAJC16Q9Y2G8 782 aa12.76□□□□□ -0.37
CCDC42-202ENST00000539522 MGAT4DA6NG13 374 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 PRMT5O14744 637 aaPredicted RBP12.75□□□□□ -0.37
CCDC42-202ENST00000539522 TPP1O14773 563 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 SLC30A4O14863 429 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 GIPC1O14908 333 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 FOXD2O60548 495 aaPredicted RBP12.75□□□□□ -0.37
CCDC42-202ENST00000539522 FAM155BO75949 473 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 AP2A2O94973 939 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 SYF2O95926 243 aaKnown RBP12.75□□□□□ -0.37
CCDC42-202ENST00000539522 CTSEP14091 401 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 ITGB6P18564 788 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 PDHA2P29803 388 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 PBLDP30039 288 aaPredicted RBP12.75□□□□□ -0.37
CCDC42-202ENST00000539522 FMO4P31512 558 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 ACTR1BP42025 376 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 ACTR1AP61163 376 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 MGAT5Q09328 741 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 LRP8Q14114 963 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 GBX1Q14549 363 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 CLCA4Q14CN2 919 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 ELOCQ15369 112 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 KBTBD12Q3ZCT8 623 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 C6orf132Q5T0Z8 1188 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 METRNLQ641Q3 311 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 MRNIPQ6NTE8 343 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 KYQ8NBH2 561 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 GPR156Q8NFN8 814 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
CCDC42-202ENST00000539522 OR2W6PQ8NHA6 318 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 UHMK1Q8TAS1 419 aaKnown RBP12.75□□□□□ -0.37
CCDC42-202ENST00000539522 NETO1Q8TDF5 533 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 FBF1Q8TES7 1133 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 HEXDCQ8WVB3 486 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 APOLD1Q96LR9 279 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 CYTH2Q99418 400 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 FAM167BQ9BTA0 163 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 ZCCHC2Q9C0B9 1178 aaKnown RBP12.75□□□□□ -0.37
CCDC42-202ENST00000539522 TMBIM4Q9HC24 238 aa12.75□□□□□ -0.37
CCDC42-202ENST00000539522 INTS10Q9NVR2 710 aaKnown RBP12.75□□□□□ -0.37
CCDC42-202ENST00000539522 ZNF624Q9P2J8 865 aaPredicted RBP12.75□□□□□ -0.37
CCDC42-202ENST00000539522 DNMT3AQ9Y6K1 912 aaPredicted RBP12.75□□□□□ -0.37
CCDC42-202ENST00000539522 SLC5A10A0PJK1 596 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 TLDC2A0PJX2 215 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 HMX2A2RU54 273 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 FLRT2O43155 660 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 NDUFS3O75489 264 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 RPL10P27635 214 aaKnown RBP12.74□□□□□ -0.37
CCDC42-202ENST00000539522 AOAHP28039 575 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 GCAP28676 217 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 STX2P32856 288 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 PREPP48147 710 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 CLCN7P51798 805 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 CDKN2DP55273 166 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 MAZP56270 477 aaKnown RBP12.74□□□□□ -0.37
CCDC42-202ENST00000539522 DNAJC3Q13217 504 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 THOC5Q13769 683 aaKnown RBP12.74□□□□□ -0.37
CCDC42-202ENST00000539522 GTF2H3Q13889 308 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 INSCQ1MX18 579 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 RSPO4Q2I0M5 234 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms