RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 RIBC1Q8N443 379 aaPredicted RBP23.1■■□□□ 1.29
TMEM260-202ENST00000538838 LILRA3Q8N6C8 439 aaPredicted RBP23.1■■□□□ 1.29
TMEM260-202ENST00000538838 CD200R1Q8TD46 325 aa23.1■■□□□ 1.29
TMEM260-202ENST00000538838 RUFY1Q96T51 708 aa23.1■■□□□ 1.29
TMEM260-202ENST00000538838 TIMM29Q9BSF4 260 aa23.1■■□□□ 1.29
TMEM260-202ENST00000538838 SLC6A14Q9UN76 642 aa23.1■■□□□ 1.29
TMEM260-202ENST00000538838 KCNK6Q9Y257 313 aa23.1■■□□□ 1.29
TMEM260-202ENST00000538838 ST14Q9Y5Y6 855 aa23.1■■□□□ 1.29
TMEM260-202ENST00000538838 FOXO6A8MYZ6 492 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 ALDOAP04075 364 aaKnown RBP23.09■■□□□ 1.29
TMEM260-202ENST00000538838 NBL1P41271 181 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 SLC12A2P55011 1212 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 ZNF658BQ4V348 819 aaPredicted RBP23.09■■□□□ 1.29
TMEM260-202ENST00000538838 AMZ2Q86W34 360 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 OR2L2Q8NH16 312 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 CCL4L1Q8NHW4 92 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 MZB1Q8WU39 189 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 SLC13A1Q9BZW2 595 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 SNX15Q9NRS6 342 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 KLC4Q9NSK0 619 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 SPATS2LQ9NUQ6 558 aaKnown RBP23.09■■□□□ 1.29
TMEM260-202ENST00000538838 LGALS13Q9UHV8 139 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 GPR179Q6PRD1 2367 aa23.09■■□□□ 1.29
TMEM260-202ENST00000538838 MGAT4DA6NG13 374 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 TPP1O14773 563 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 PHGDHO43175 533 aaKnown RBP23.08■■□□□ 1.29
TMEM260-202ENST00000538838 CELA2BP08218 269 aaPredicted RBP23.08■■□□□ 1.29
TMEM260-202ENST00000538838 SERPINB8P50452 374 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 BLKP51451 505 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 ARHGAP8P85298 464 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 NFE2L1Q14494 772 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 ZKSCAN8Q15776 578 aaPredicted RBP23.08■■□□□ 1.29
TMEM260-202ENST00000538838 LGSNQ5TDP6 509 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 TCEAL6Q6IPX3 200 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 XKR5Q6UX68 686 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 FAM83HQ6ZRV2 1179 aaPredicted RBP23.08■■□□□ 1.29
TMEM260-202ENST00000538838 OTOAQ7RTW8 1153 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 HM13Q8TCT9 377 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 TCEAL3Q969E4 200 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 LRRC61Q9BV99 259 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 VIPAS39Q9H9C1 493 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 ERVMER34-1Q9H9K5 563 aa23.08■■□□□ 1.29
TMEM260-202ENST00000538838 TRMT6Q9UJA5 497 aaKnown RBP23.08■■□□□ 1.29
TMEM260-202ENST00000538838 DNMT3AQ9Y6K1 912 aaPredicted RBP23.08■■□□□ 1.29
TMEM260-202ENST00000538838 MAP2K7O14733 419 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 RETP07949 1114 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 STMN1P16949 149 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 AK4P27144 223 aaPredicted RBP23.08■■□□□ 1.28
TMEM260-202ENST00000538838 AOAHP28039 575 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 CTBSQ01459 385 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 PDAP1Q13442 181 aaKnown RBP23.08■■□□□ 1.28
TMEM260-202ENST00000538838 SYTL3Q4VX76 610 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 PLA2G2CQ5R387 149 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 ZBTB2Q8N680 514 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 MTBPQ96DY7 904 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 TSPAN17Q96FV3 270 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 OSGEPL1Q9H4B0 414 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 COG4Q9H9E3 785 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 TRNAU1APQ9NX07 287 aaKnown RBP23.08■■□□□ 1.28
TMEM260-202ENST00000538838 DHRS7Q9Y394 339 aa23.08■■□□□ 1.28
TMEM260-202ENST00000538838 AGPSO00116 658 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 CTSEP14091 401 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 CD9P21926 228 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 GMPRP36959 345 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 PREPP48147 710 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 RAB10P61026 200 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 C1orf61Q13536 156 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 LRP8Q14114 963 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 PRRT3Q5FWE3 981 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 ELF4Q99607 663 aaPredicted RBP23.07■■□□□ 1.28
TMEM260-202ENST00000538838 CENPHQ9H3R5 247 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 LATS2Q9NRM7 1088 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 TSR3Q9UJK0 312 aaKnown RBP23.07■■□□□ 1.28
TMEM260-202ENST00000538838 GMEB2Q9UKD1 530 aa23.07■■□□□ 1.28
TMEM260-202ENST00000538838 C17orf113A0A1B0GUU1 675 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 H3BM21 787 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 SDC3O75056 442 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 GSTM1P09488 218 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 VCLP18206 1134 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 KRT15P19012 456 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 IRX4P78413 519 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 GSTM4Q03013 218 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 HSPA14Q0VDF9 509 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 UGT3A1Q6NUS8 523 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 PAQR3Q6TCH7 311 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 RAPH1Q70E73 1250 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 NRROSQ86YC3 692 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 CPNE9Q8IYJ1 553 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 CFAP206Q8IYR0 622 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 ISL2Q96A47 359 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 NUSAP1Q9BXS6 441 aaKnown RBP23.06■■□□□ 1.28
TMEM260-202ENST00000538838 CDYLQ9Y232 598 aa23.06■■□□□ 1.28
TMEM260-202ENST00000538838 PRR19A6NJB7 356 aa23.05■■□□□ 1.28
TMEM260-202ENST00000538838 ARHGAP33O14559 1287 aa23.05■■□□□ 1.28
TMEM260-202ENST00000538838 APOA4P06727 396 aa23.05■■□□□ 1.28
TMEM260-202ENST00000538838 TYK2P29597 1187 aa23.05■■□□□ 1.28
TMEM260-202ENST00000538838 ACTR1BP42025 376 aa23.05■■□□□ 1.28
TMEM260-202ENST00000538838 MAGEA12P43365 314 aa23.05■■□□□ 1.28
TMEM260-202ENST00000538838 ACTR1AP61163 376 aa23.05■■□□□ 1.28
TMEM260-202ENST00000538838 HNRNPKP61978 463 aaKnown RBP eCLIP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms