RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 KDELC1Q6UW63 502 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TFAP2DQ7Z6R9 452 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 STK32CQ86UX6 486 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZNF677Q86XU0 584 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 RHOT1Q8IXI2 618 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 FAM217AQ8IXS0 508 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CLYBLQ8N0X4 340 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PNPLA1Q8N8W4 532 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ANKFN1Q8N957 763 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZMIZ2Q8NF64 920 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DNERQ8NFT8 737 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 RDH11Q8TC12 318 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SLC7A6Q92536 515 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DLG3Q92796 817 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 FAF2Q96CS3 445 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 LRRC39Q96DD0 335 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 LGALS12Q96DT0 336 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 NRBF2Q96F24 287 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZDHHC15Q96MV8 337 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 RMDN3Q96TC7 470 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 RHOBTB2Q9BYZ6 727 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DCSTAMPQ9H295 470 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DHX33Q9H6R0 707 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 CATSPERBQ9H7T0 1116 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DBNDD1Q9H9R9 158 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 C6orf50Q9HD87 102 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 AMBNQ9NP70 447 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TNFRSF12AQ9NP84 129 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 NGRNQ9NPE2 291 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 SLC22A11Q9NSA0 550 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 RAB20Q9NX57 234 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 HSPBP1Q9NZL4 362 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CXXC1Q9P0U4 656 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 TJP2Q9UDY2 1190 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SORCS3Q9UPU3 1222 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 AGTPBP1Q9UPW5 1226 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SHOC2Q9UQ13 582 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ERVK-19Q9WJR5 959 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 BTBD3Q9Y2F9 522 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZNF175Q9Y473 711 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 RLFQ13129 1914 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TEX51A0A1B0GUA7 166 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 A0A1W2PRG6 482 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DHRS12A0PJE2 317 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ASB14A6NK59 587 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZNF99A8MXY4 864 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 E9PAM4 449 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 H3BMM5 538 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DSCR3O14972 297 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PAPSS1O43252 624 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 GRID2O43424 1007 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PROSCO94903 275 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CBX7O95931 251 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CHRNA1P02708 482 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SYPP08247 313 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 HNRNPLP14866 589 aaKnown RBP eCLIP3.68□□□□□ -1.82
MCF2-210ENST00000536274 PCMT1P22061 227 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 RPS3P23396 243 aaKnown RBP eCLIP3.68□□□□□ -1.82
MCF2-210ENST00000536274 CD6P30203 668 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CSTF2P33240 577 aaKnown RBP eCLIP3.68□□□□□ -1.82
MCF2-210ENST00000536274 CRHR1P34998 444 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 AVPR1AP37288 418 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DDOSTP39656 456 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 BRCC3P46736 316 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 GABRB2P47870 512 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ABATP80404 500 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 POU4F1Q01851 419 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 MVKQ03426 396 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CD47Q08722 323 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CRHR2Q13324 411 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DPYSL3Q14195 570 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 NFE2L1Q14494 772 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 GRM3Q14832 879 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 GRM4Q14833 912 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TRIP4Q15650 581 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 LTB4RQ15722 352 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZNF124Q15973 351 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CYP51A1Q16850 503 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 UGP2Q16851 508 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CLEC16AQ2KHT3 1053 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 C1orf220Q5T0J3 134 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PDSS1Q5T2R2 415 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 GALNT5Q7Z7M9 940 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 P2RY8Q86VZ1 359 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TMEM126BQ8IUX1 230 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 P3H2Q8IVL5 708 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZNF565Q8N9K5 539 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 NLGN4YQ8NFZ3 816 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 WDR48Q8TAF3 677 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SLC2A14Q8TDB8 520 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 C2CD4CQ8TF44 421 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 FRS2Q8WU20 508 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 POF1BQ8WVV4 589 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 MUL1Q969V5 352 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 MYO19Q96H55 970 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 MCEEQ96PE7 176 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZBTB18Q99592 522 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TMEM47Q9BQJ4 181 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 LXNQ9BS40 222 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CNPY3Q9BT09 278 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms