RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 ZNF404Q494X3 552 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 FUT11Q495W5 492 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 SETMARQ53H47 684 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 XKR4Q5GH76 650 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 RAB41Q5JT25 222 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 COLEC12Q5KU26 742 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 CAPN13Q6MZZ7 669 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 ENPP6Q6UWR7 440 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 EFL1Q7Z2Z2 1120 aaKnown RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 GPR149Q86SP6 731 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 SYVN1Q86TM6 617 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 RALGPS2Q86X27 583 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 CALHM3Q86XJ0 350 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 RIOX2Q8IUF8 465 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 CILP2Q8IUL8 1156 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 RAVER1Q8IY67 606 aaKnown RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 NLGN4XQ8N0W4 816 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 CELF2-AS1Q8N7Q2 184 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 POC5Q8NA72 575 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 PDZD8Q8NEN9 1154 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 IPMKQ8NFU5 416 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 GPR150Q8NGU9 434 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 MCFD2Q8NI22 146 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 ANGPTL6Q8NI99 470 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 ITFG1Q8TB96 612 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 CNIH3Q8TBE1 160 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 PROKR1Q8TCW9 393 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 FRS2Q8WU20 508 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 RPL3LQ92901 407 aaKnown RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 GLMNQ92990 594 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 FATE1Q969F0 183 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 FAM149B1Q96BN6 582 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 LGALS12Q96DT0 336 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 ST6GAL2Q96JF0 529 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 CDK5RAP1Q96SZ6 601 aaKnown RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 SDHCQ99643 169 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 ARPC5LQ9BPX5 153 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 C17orf80Q9BSJ5 609 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 ULBP1Q9BZM6 244 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 CEP44Q9C0F1 390 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 NOL6Q9H6R4 1146 aaKnown RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 AS3MTQ9HBK9 375 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 EXD2Q9NVH0 621 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 QPCTLQ9NXS2 382 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 VNN3Q9NY84 501 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 CCDC59Q9P031 241 aaKnown RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 MARCH4Q9P2E8 410 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 ZNF219Q9P2Y4 722 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 CRNNQ9UBG3 495 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-215ENST00000536145 C3orf18Q9UK00 162 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 UTS2RQ9UKP6 389 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 TRAPPC4Q9Y296 219 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 TPRKBQ9Y3C4 175 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 WDR90Q96KV7 1748 aa6.84□□□□□ -1.31
CPSF7-215ENST00000536145 SYNJ2BP-COX16A0A087WUM0 186 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 A0A0U1RQS6 177 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 TBKBP1A7MCY6 615 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 STX16O14662 325 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 BCKDKO14874 412 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 TBX1O43435 398 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 MAN1A2O60476 641 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 KERAO60938 352 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 MITFO75030 526 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 SEC22BO75396 215 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 SCELO95171 688 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 KRT75O95678 551 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ANGPTL1O95841 491 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 PEX11BO96011 259 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 IGLV3-25P01717 112 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ABCB1P08183 1280 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 NPR3P17342 541 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 HOXB9P17482 250 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 PFKLP17858 780 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 FMO3P31513 532 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 TGFBR1P36897 503 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 MAGEA2P43356 314 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 HTR3AP46098 478 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 TRPC1P48995 793 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ARSDP51689 593 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 WNT3AP56704 352 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ZNF280AP59817 542 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 LSM3P62310 102 aaKnown RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 TUBA1BP68363 451 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ZNF45Q02386 682 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 VAC14Q08AM6 782 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 DMPKQ09013 629 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 LCP2Q13094 533 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 RPS6KA2Q15349 733 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 DUSP7Q16829 419 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 TRIM71Q2Q1W2 868 aaKnown RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 YIF1BQ5BJH7 314 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 NOMO2Q5JPE7 1267 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 TOR1AIP1Q5JTV8 583 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 C6orf136Q5SQH8 315 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ATAD3CQ5T2N8 411 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 MFSD4BQ5TF39 518 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 SHQ1Q6PI26 577 aaKnown RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 CCBE1Q6UXH8 406 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 LBX2Q6XYB7 198 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 Q6ZSR9 355 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms