RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CDKN1CP49918 316 aaPredicted RBP12.14□□□□□ -0.47
SCARB1-204ENST00000535005 ARFIP2P53365 341 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 LRRC23Q53EV4 343 aaPredicted RBP12.14□□□□□ -0.47
SCARB1-204ENST00000535005 RAET1GQ6H3X3 334 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 TAS2R42Q7RTR8 314 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 SERPINA9Q86WD7 417 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 SLC41A1Q8IVJ1 513 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 DENND6AQ8IWF6 608 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 DDHD1Q8NEL9 900 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 FAM81AQ8TBF8 368 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 FAM174AQ8TBP5 190 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 HEXDCQ8WVB3 486 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 DNASE2BQ8WZ79 361 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 COX14Q96I36 57 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 TEX101Q9BY14 249 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 FAM96AQ9H5X1 160 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 INTS10Q9NVR2 710 aaKnown RBP12.14□□□□□ -0.47
SCARB1-204ENST00000535005 ZDHHC3Q9NYG2 299 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 CRLS1Q9UJA2 301 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 GRID1Q9ULK0 1009 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 FPGTO14772 594 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 PFDN6O15212 129 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 LILRB5O75023 590 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 FKBP6O75344 327 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 KRT36O76013 467 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 S1PR4O95977 384 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 ESRRAP11474 423 aaPredicted RBP12.14□□□□□ -0.47
SCARB1-204ENST00000535005 ACRV1P26436 265 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 SLC1A2P43004 574 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 CTBP1Q13363 440 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 INPP5AQ14642 412 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 DBN1Q16643 649 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 LDLRAP1Q5SW96 308 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 GPRC6AQ5T6X5 926 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 RNF220Q5VTB9 566 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 AAGABQ6PD74 315 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 LPCAT2Q7L5N7 544 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 ABI3BPQ7Z7G0 1075 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 PPM1NQ8N819 430 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 NRG4Q8WWG1 115 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 SLC44A1Q8WWI5 657 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 ZC3H10Q96K80 434 aaKnown RBP12.14□□□□□ -0.47
SCARB1-204ENST00000535005 BMFQ96LC9 184 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 CPNE1Q99829 537 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 MCMBPQ9BTE3 642 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 EPB41L1Q9H4G0 881 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 MANSC1Q9H8J5 431 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 VPS9D1Q9Y2B5 631 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 PCDHGA2Q9Y5H1 932 aa12.14□□□□□ -0.47
SCARB1-204ENST00000535005 BPTFQ12830 3046 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 ZNF318Q5VUA4 2279 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 FOXO6A8MYZ6 492 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 POC1B-GALNT4F8VUJ3 575 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 GPR39O43194 453 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 AHSGP02765 367 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 PCCBP05166 539 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 DHRS4L1P0CG22 281 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 GABRB3P28472 473 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 CRABP2P29373 138 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 PMLP29590 882 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 GP5P40197 560 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 PTGER3P43115 390 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 CSE1LP55060 971 aaKnown RBP12.13□□□□□ -0.47
SCARB1-204ENST00000535005 ADARP55265 1226 aaKnown RBP12.13□□□□□ -0.47
SCARB1-204ENST00000535005 POLE2P56282 527 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 PFN3P60673 137 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 YPEL5P62699 121 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 AP2B1P63010 937 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 PMS2CLQ68D20 193 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 PACS1Q6VY07 963 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 GCNT7Q6ZNI0 430 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 PHYKPLQ8IUZ5 450 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 CTAGE3PQ8IX95 158 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 ST13P4Q8IZP2 240 aaPredicted RBP12.13□□□□□ -0.47
SCARB1-204ENST00000535005 B4GALNT2Q8NHY0 566 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 C1orf216Q8TAB5 229 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 HIC2Q96JB3 615 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 COPS8Q99627 209 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 TSSK1BQ9BXA7 367 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 WDR26Q9H7D7 661 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 FZD3Q9NPG1 666 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 ARL8BQ9NVJ2 186 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 HEY2Q9UBP5 337 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 PSAT1Q9Y617 370 aa12.13□□□□□ -0.47
SCARB1-204ENST00000535005 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 POM121BA6NF01 834 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 NDUFS3O75489 264 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 PIAS1O75925 651 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 SLC25A14O95258 325 aaPredicted RBP12.12□□□□□ -0.47
SCARB1-204ENST00000535005 LYNP07948 512 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 KRT4P19013 534 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 CDK3Q00526 305 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 EFTUD2Q15029 972 aaKnown RBP eCLIP12.12□□□□□ -0.474e-7■■■■□ 26.1
SCARB1-204ENST00000535005 SMAD1Q15797 465 aaKnown RBP12.12□□□□□ -0.47
SCARB1-204ENST00000535005 WDR45BQ5MNZ6 344 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 SH2D4BQ5SQS7 431 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 GRTP1Q5TC63 336 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 KYAT3Q6YP21 454 aaKnown RBP12.12□□□□□ -0.47
SCARB1-204ENST00000535005 STRA8Q7Z7C7 330 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms