RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 KIR2DS3K7RE56 304 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 HCRTR1O43613 425 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 IPO7O95373 1038 aaKnown RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 AP2A1O95782 977 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 IFNB1P01574 187 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 C9P02748 559 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 FURINP09958 794 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 LIPCP11150 499 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 FOLR1P15328 257 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 ITGB6P18564 788 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 MSH3P20585 1137 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 IDSP22304 550 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 CSTF2P33240 577 aaKnown RBP eCLIP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 MC2RQ01718 297 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 DMPKQ09013 629 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 EIF3IQ13347 325 aaKnown RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 KIR2DS5Q14953 304 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 BRD3Q15059 726 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 TRIP13Q15645 432 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 LDLRAP1Q5SW96 308 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 AGAP9Q5VTM2 703 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 ITPRIPL1Q6GPH6 555 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 IRGCQ6NXR0 463 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 TTC27Q6P3X3 843 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 WDR74Q6RFH5 385 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 CES3Q6UWW8 571 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 ZNF534Q76KX8 674 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 TMEM135Q86UB9 458 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 FAM20CQ8IXL6 584 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 NXPE1Q8N323 547 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 UBL4BQ8N7F7 174 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 AGBL5Q8NDL9 886 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 OR13J1Q8NGT2 312 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 SNRNP27Q8WVK2 155 aaKnown RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 CDKN2AIPNLQ96HQ2 116 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 UBL7Q96S82 380 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 MAP3K3Q99759 626 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 ZMYND15Q9H091 742 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 KLHL25Q9H0H3 589 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 KCNF1Q9H3M0 494 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 XKR8Q9H6D3 395 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 IMP3Q9NV31 184 aaKnown RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 NLE1Q9NVX2 485 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 SMOXQ9NWM0 555 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 HACD3Q9P035 362 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 MARCH4Q9P2E8 410 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 PILRAQ9UKJ1 303 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 PRRC2CQ9Y520 2896 aaKnown RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 UTP20O75691 2785 aaKnown RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 FLNCQ14315 2725 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 COL6A6A6NMZ7 2263 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 CCDC88CQ9P219 2028 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 IGLV3-16A0A075B6K0 115 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 TRBV5-4A0A0C4DH59 114 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 MGAT4DA6NG13 374 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 LILRA5A6NI73 299 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 C2orf81A6NN90 581 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 IQCF5A8MTL0 148 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 MIF4GDA9UHW6 222 aaKnown RBP9.41□□□□□ -0.9
SSBP3-215ENST00000533946 BTN3A3O00478 584 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 HGSO14964 777 aaPredicted RBP9.41□□□□□ -0.9
SSBP3-215ENST00000533946 FAM87AP0C7U9 286 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 FOXN2P32314 431 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 CSE1LP55060 971 aaKnown RBP9.41□□□□□ -0.9
SSBP3-215ENST00000533946 FOXL2P58012 376 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 GPLD1P80108 840 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 TBR1Q16650 682 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 ZRANB3Q5FWF4 1079 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 CAPRIN2Q6IMN6 1127 aaKnown RBP9.41□□□□□ -0.9
SSBP3-215ENST00000533946 LCN10Q6JVE6 187 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 WASH2PQ6VEQ5 465 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 TAS2R42Q7RTR8 314 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 VRK3Q8IV63 474 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 TRIM48Q8IWZ4 208 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 CXorf40BQ96DE9 158 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 C12orf66Q96MD2 445 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 SLC12A9Q9BXP2 914 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 WASH6PQ9NQA3 447 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 RAD18Q9NS91 495 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
SSBP3-215ENST00000533946 CRLS1Q9UJA2 301 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 PLAGL1Q9UM63 463 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 ZNF148Q9UQR1 794 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 AAR2Q9Y312 384 aaKnown RBP9.41□□□□□ -0.9
SSBP3-215ENST00000533946 FER1L5A0AVI2 2057 aa9.41□□□□□ -0.9
SSBP3-215ENST00000533946 OR6C74A6NCV1 312 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 B4E171 279 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 GPR89AB7ZAQ6 455 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 TMX2-CTNND1H3BSU7 103 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 K7EM74 188 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 RAD1O60671 282 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 AVILO75366 819 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 EBLN1P0CF75 366 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 GPR89BP0CG08 455 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 MTHFD1P11586 935 aaKnown RBP9.4□□□□□ -0.9
SSBP3-215ENST00000533946 PVRP15151 417 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 AMD1P17707 334 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 POLR2CP19387 275 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-215ENST00000533946 ACRV1P26436 265 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 TSPAN7P41732 249 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms