RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 MYCLP1P12525 358 aaPredicted RBP11.19□□□□□ -0.62
NXF1-211ENST00000531709 OGNP20774 298 aaKnown RBP11.19□□□□□ -0.62
NXF1-211ENST00000531709 HTR6P50406 440 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 ATP4BP51164 291 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 YBEYP58557 167 aaPredicted RBP11.19□□□□□ -0.62
NXF1-211ENST00000531709 SEMA3AQ14563 771 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 PABPC1LQ4VXU2 614 aaKnown RBP11.19□□□□□ -0.62
NXF1-211ENST00000531709 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
NXF1-211ENST00000531709 HACD2Q6Y1H2 254 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 OR4F6Q8NGB9 312 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 PSMA8Q8TAA3 256 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 HMGCLL1Q8TB92 370 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 SLC13A3Q8WWT9 602 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 TMEM125Q96AQ2 219 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 CEP19Q96LK0 163 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 SLC30A3Q99726 388 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 NSUN3Q9H649 340 aaKnown RBP11.19□□□□□ -0.62
NXF1-211ENST00000531709 HSFX1Q9UBD0 423 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 ATP11BQ9Y2G3 1177 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 ST14Q9Y5Y6 855 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 A0A1B0GTL3 188 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 PRMT5O14744 637 aaPredicted RBP11.19□□□□□ -0.62
NXF1-211ENST00000531709 DIRAS1O95057 198 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 FADS2O95864 444 aaKnown RBP11.19□□□□□ -0.62
NXF1-211ENST00000531709 KRT6AP02538 564 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 KRT6BP04259 564 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 EPB42P16452 691 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 AQP1P29972 269 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 SLC26A3P40879 764 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 KRT6CP48668 564 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 BOP1Q14137 746 aaKnown RBP11.19□□□□□ -0.62
NXF1-211ENST00000531709 PTPRRQ15256 657 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 TGFBIQ15582 683 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 PSAPL1Q6NUJ1 521 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 ADAMTSL2Q86TH1 951 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 CENPSQ8N2Z9 138 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 LIX1Q8N485 282 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 ZNF385DQ9H6B1 395 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 ABCB10Q9NRK6 738 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 GKN1Q9NS71 199 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 OSER1Q9NX31 292 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 TUBA8Q9NY65 449 aaPredicted RBP11.19□□□□□ -0.62
NXF1-211ENST00000531709 GMPPBQ9Y5P6 360 aa11.19□□□□□ -0.62
NXF1-211ENST00000531709 RBM47A0AV96 593 aaKnown RBP11.18□□□□□ -0.62
NXF1-211ENST00000531709 XPNPEP2O43895 674 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 CDH1P12830 882 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 FMO3P31513 532 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 TRPC1P48995 793 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 GALNT1Q10472 559 aaPredicted RBP11.18□□□□□ -0.62
NXF1-211ENST00000531709 SERINC3Q13530 473 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 ZCCHC8Q6NZY4 707 aaKnown RBP11.18□□□□□ -0.62
NXF1-211ENST00000531709 LEMD2Q8NC56 503 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 SEZ6LQ9BYH1 1024 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 TUBB1Q9H4B7 451 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 RMND5AQ9H871 391 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 TRMT13Q9NUP7 481 aaKnown RBP11.18□□□□□ -0.62
NXF1-211ENST00000531709 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.18□□□□□ -0.62
NXF1-211ENST00000531709 PTPRFP10586 1907 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 ARID2Q68CP9 1835 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 LOC100506127A0A0U1RQW1 187 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 A0A1W2PQ67 120 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 K7EPI3 171 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 ANGPTL1O95841 491 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 CHRNA1P02708 482 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 FAM163BP0C2L3 166 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 GNPDA1P46926 289 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 SLC36A3Q495N2 470 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 FAM117BQ6P1L5 589 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 ZNF598Q86UK7 904 aaKnown RBP11.18□□□□□ -0.62
NXF1-211ENST00000531709 ARL10Q8N8L6 244 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 RAB2BQ8WUD1 216 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 ZNF599Q96NL3 588 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 BIRC8Q96P09 236 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 DERL2Q9GZP9 239 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 AMBNQ9NP70 447 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 EXOSC4Q9NPD3 245 aaKnown RBP11.18□□□□□ -0.62
NXF1-211ENST00000531709 AIG1Q9NVV5 245 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 TMEM248Q9NWD8 314 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 FLRT1Q9NZU1 646 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 SSC5DA1L4H1 1573 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 hCG_2039718K7EN88 272 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 CXCR6O00574 342 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 SERPINA1P01009 418 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 ST13P50502 369 aaKnown RBP11.18□□□□□ -0.62
NXF1-211ENST00000531709 ALDH3A2P51648 485 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 TRIP4Q15650 581 aaPredicted RBP11.18□□□□□ -0.62
NXF1-211ENST00000531709 ATP6AP1Q15904 470 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 SPANXN4Q5MJ08 99 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 KANK2Q63ZY3 851 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 SPPL2AQ8TCT8 520 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 UTP15Q8TED0 518 aaKnown RBP11.18□□□□□ -0.62
NXF1-211ENST00000531709 ITFG2Q969R8 447 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 FUBP1Q96AE4 644 aaKnown RBP11.18□□□□□ -0.62
NXF1-211ENST00000531709 NSMCE3Q96MG7 304 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 MUC13Q9H3R2 512 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 PSME2Q9UL46 239 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 SPO11Q9Y5K1 396 aa11.18□□□□□ -0.62
NXF1-211ENST00000531709 A0A0U1RQF3 1178 aa11.17□□□□□ -0.62
NXF1-211ENST00000531709 MBL2P11226 248 aaPredicted RBP11.17□□□□□ -0.62
NXF1-211ENST00000531709 CLCN2P51788 898 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms