RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 KIAA1161Q6NSJ0 714 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 DSTYKQ6XUX3 929 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 Q6ZSV7 163 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 TMTC3Q6ZXV5 915 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 RRM2BQ7LG56 351 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 TMCO2Q7Z6W1 182 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-212ENST00000529046 CRYGNQ8WXF5 182 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 RSPH1Q8WYR4 309 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 YME1L1Q96TA2 773 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 PCYT2Q99447 389 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 MXRA8Q9BRK3 442 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 UPF3BQ9BZI7 483 aaKnown RBP4.83□□□□□ -1.64
CSDE1-212ENST00000529046 NPFFR1Q9GZQ6 430 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 AZI2Q9H6S1 392 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 SLC9A2Q9UBY0 812 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 NDRG3Q9UGV2 375 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 TUBE1Q9UJT0 475 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 MYO9BQ13459 2157 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 COL1A2P08123 1366 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 MYH6P13533 1939 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 PTPRSQ13332 1948 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 ADGRA3Q8IWK6 1321 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 IGSF9BQ9UPX0 1349 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 SIP14410 1827 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 A0A087X0M5 115 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 A0A1B0GX30 115 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 ESYT2A0FGR8 921 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 NPIPB15A6NHN6 443 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 HSPB2A8KAH6 182 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 BECN2A8MW95 431 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 MS4A18H0YCH9 400 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 WNT9BO14905 357 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 SMAD6O43541 496 aaKnown RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 SH3BP5O60239 455 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 PLEKHA8P1O95397 391 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 MMP1P03956 469 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 STAG3L1P0CL83 205 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 UBL4AP11441 157 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 SLC2A4P14672 509 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 KCNA5P22460 613 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 PSMA4P25789 261 aaKnown RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 CDC25AP30304 524 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 KRT9P35527 623 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 CPOXP36551 454 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 CDKN2AP42771 156 aaKnown RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 PGGT1BP53609 377 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 IRX6P78412 446 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 MRPS6P82932 125 aaKnown RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 Q0VFX4 171 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 SIM2Q14190 667 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 KRT32Q14532 448 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 HSPB2Q16082 182 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 CEP55Q53EZ4 464 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 BMP2KLQ5H9B9 411 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 C1orf122Q6ZSJ8 110 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 MEPCEQ7L2J0 689 aaKnown RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 ZNF367Q7RTV3 350 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 TBC1D26Q86UD7 250 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 SFTPA2Q8IWL1 248 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 ADHFE1Q8IWW8 467 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 RASSF8Q8NHQ8 419 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 GPT2Q8TD30 523 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 KLHL29Q96CT2 875 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 FAM122AQ96E09 287 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 THOC3Q96J01 351 aaKnown RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 NEK1Q96PY6 1258 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 SDF4Q9BRK5 362 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 POLDIP3Q9BY77 421 aaKnown RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 SLC25A18Q9H1K4 315 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 HIPK2Q9H2X6 1198 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 CATSPERBQ9H7T0 1116 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 MRPL44Q9H9J2 332 aaKnown RBP4.82□□□□□ -1.64
CSDE1-212ENST00000529046 BARHL2Q9NY43 387 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 MYH7BA7E2Y1 1941 aa4.82□□□□□ -1.64
CSDE1-212ENST00000529046 NID2Q14112 1375 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 MICAL3Q7RTP6 2002 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 TEX13CA0A0J9YWL9 993 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 A0A1W2PPH5 198 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 NPIPB11E5RHQ5 1161 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 M0QZ92 97 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 MAGEB2O15479 319 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 RGS14O43566 566 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 DCXO43602 365 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 SLC25A17O43808 307 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 RTN3O95197 1032 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 CLEC3BP05452 202 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 CENPBP07199 599 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 GHRP10912 638 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 EDN2P20800 178 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 AGAP20933 346 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 ARRB2P32121 409 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 EVCP57679 992 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 ROR2Q01974 943 aaKnown RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 COASYQ13057 564 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 BTG3Q14201 252 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 PLCB4Q15147 1175 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 SHBQ15464 509 aa4.81□□□□□ -1.64
CSDE1-212ENST00000529046 TSTQ16762 297 aaKnown RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 HIST2H2ACQ16777 129 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-212ENST00000529046 DCAF6Q58WW2 860 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms