RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ELMO1Q92556 727 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ALKBH8Q96BT7 664 aaKnown RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ELMO2Q96JJ3 720 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 HIST1H2AHQ96KK5 128 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 PAFAH2Q99487 392 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 AGAP2Q99490 1192 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 GPR22Q99680 433 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 CDC6Q99741 560 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 HIST1H2AJQ99878 128 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 AARSD1Q9BTE6 412 aaKnown RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 H2AFJQ9BTM1 129 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 TMEM109Q9BVC6 243 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 IQCGQ9H095 443 aaKnown RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 FAM96AQ9H5X1 160 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 EBF2Q9HAK2 575 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 FGF22Q9HCT0 170 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 SEMA4GQ9NTN9 838 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 NLGN3Q9NZ94 848 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 PCOLCE2Q9UKZ9 415 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 TMCO1Q9UM00 188 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 CRYL1Q9Y2S2 319 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 SNX11Q9Y5W9 270 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 LRP4O75096 1905 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ATXN2Q99700 1313 aaKnown RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 TDRD6O60522 2096 aaKnown RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 UQCRHLA0A096LP55 91 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 FAM95CA0A1B0GW59 222 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 OR51F1A6NGY5 319 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 SYCE1LA8MT33 242 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 PDZK1P1A8MUH7 402 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 GOLGA8KD6RF30 607 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 POC1B-GALNT4F8VUJ3 575 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 GOLGA8TH3BQL2 631 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 MATN2O00339 956 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 CCL22O00626 93 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 SLC16A5O15375 505 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ZBTB14O43829 449 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 PIAS2O75928 621 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 HAUS5O94927 633 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 CATP04040 527 aaKnown RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 C8GP07360 202 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 UQCRHP07919 91 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ENO2P09104 434 aaPredicted RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 FAM153BP0C7A2 387 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 MPC1LP0DKB6 136 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ACP5P13686 325 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 F3P13726 295 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ENGP17813 658 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 KRT15P19012 456 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 EPHA8P29322 1005 aaPredicted RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 TYK2P29597 1187 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ACTR1BP42025 376 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 CCT5P48643 541 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 LIMK1P53667 647 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 RAB10P61026 200 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ACTR1AP61163 376 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ATP6V0D1P61421 351 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 NAA20P61599 178 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 CTBSQ01459 385 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 NAA25Q14CX7 972 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 LPAL2Q16609 132 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 CLPPQ16740 277 aaPredicted RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 FAM83EQ2M2I3 478 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 UAP1L1Q3KQV9 507 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 FAM153CQ494X1 144 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 FAM182AQ5T1J6 154 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 HECTD2Q5U5R9 776 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 METRNLQ641Q3 311 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 TRMT10BQ6PF06 316 aaKnown RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 CRTC3Q6UUV7 619 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 UNC5DQ6UXZ4 953 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 RAPH1Q70E73 1250 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 DET1Q7L5Y6 550 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ADAMTSL2Q86TH1 951 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 DENND6AQ8IWF6 608 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 CFAP206Q8IYR0 622 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 MYO1HQ8N1T3 1032 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 MINDY1Q8N5J2 469 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ZBTB2Q8N680 514 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ZNF548Q8NEK5 533 aaPredicted RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 LMX1AQ8TE12 382 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 SKA2Q8WVK7 121 aaPredicted RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ATL1Q8WXF7 558 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 NAT6Q93015 286 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 SGF29Q96ES7 293 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 PDXPQ96GD0 296 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 PDLIM5Q96HC4 596 aaKnown RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 DPYSL5Q9BPU6 564 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 EDEM2Q9BV94 578 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 GTPBP2Q9BX10 602 aaKnown RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 LGR4Q9BXB1 951 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 OSGEPL1Q9H4B0 414 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 SLC32A1Q9H598 525 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 MVB12BQ9H7P6 319 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 NMRAL1Q9HBL8 299 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 GPAMQ9HCL2 828 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 FBXO6Q9NRD1 293 aaPredicted RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 TM7SF3Q9NS93 570 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 KLC4Q9NSK0 619 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 TMEM74BQ9NUR3 256 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms