RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CHAF1BQ13112 559 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 TNFAIP1Q13829 316 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 KRT24Q2M2I5 525 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 DUSP28Q4G0W2 176 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 CDONQ4KMG0 1287 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 CCBE1Q6UXH8 406 aaPredicted RBP5.73□□□□□ -1.49
PCF11-202ENST00000528336 DPPA4Q7L190 304 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 SLFN11Q7Z7L1 901 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 NBPF5PQ86XG9 351 aaPredicted RBP5.73□□□□□ -1.49
PCF11-202ENST00000528336 CCDC170Q8IYT3 715 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 ADSSL1Q8N142 457 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 OR2AK2Q8NG84 335 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 MOSPD2Q8NHP6 518 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 GDAP1Q8TB36 358 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 HMGCLL1Q8TB92 370 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 ARHGEF26Q96DR7 871 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 BICD1Q96G01 975 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 GRAMD2BQ96HH9 432 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 IGSF21Q96ID5 467 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 WDR26Q9H7D7 661 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 ERVMER34-1Q9H9K5 563 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 SEBOXQ9HB31 216 aaPredicted RBP5.73□□□□□ -1.49
PCF11-202ENST00000528336 C1RLQ9NZP8 487 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 DUSP12Q9UNI6 340 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 E9PCH4 1651 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 PREX1Q8TCU6 1659 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 DOCK7Q96N67 2140 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 SYNMO15061 1565 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 A2ML1A8K2U0 1454 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 PLA2R1Q13018 1463 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 DENND3A2RUS2 1198 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 MAGEA13PA6NCF6 341 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 LIPT2A6NK58 231 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 HNRNPCL2B2RXH8 293 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 MID1O15344 667 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 FMO6PO60774 539 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 RFPL2O75678 378 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 GJB3O75712 270 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 CSPG5O95196 566 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 GUCA1CO95843 209 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 LINC00271P0C7V0 271 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 PPARGP37231 505 aaPredicted RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 HADHAP40939 763 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 CSNK2A1P68400 391 aaPredicted RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 ECT2LQ008S8 904 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 MC1RQ01726 317 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 GRIK2Q13002 908 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 TMED1Q13445 227 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 MAMLD1Q13495 774 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 ADIPOQQ15848 244 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 WSCD2Q2TBF2 565 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 NCEH1Q6PIU2 408 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 SPSB3Q6PJ21 355 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 IKBIPQ70UQ0 350 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 SZRD1Q7Z422 152 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 ARHGAP12Q8IWW6 846 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 CHERPQ8IWX8 916 aaKnown RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 ZNF34Q8IZ26 560 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 KCTD6Q8NC69 237 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 CSNK2A3Q8NEV1 391 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 DUSP19Q8WTR2 217 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 FAM120BQ96EK7 910 aaKnown RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 TMEM19Q96HH6 336 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 ZNF385AQ96PM9 386 aaKnown RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 DUX5Q96PT3 197 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 TRIM6Q9C030 488 aaPredicted RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 RABEP2Q9H5N1 569 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 DDX31Q9H8H2 851 aaKnown RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 WWOXQ9NZC7 414 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 ZNF224Q9NZL3 707 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 CPSF2Q9P2I0 782 aaKnown RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 SMC3Q9UQE7 1217 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 R3HDM2Q9Y2K5 976 aaKnown RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 LOXL2Q9Y4K0 774 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 LRP12Q9Y561 859 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 MYO3AQ8NEV4 1616 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 TRPM2O94759 1503 aa5.72□□□□□ -1.49
PCF11-202ENST00000528336 PDS5AQ29RF7 1337 aaKnown RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 CEP170BQ9Y4F5 1589 aaPredicted RBP5.72□□□□□ -1.49
PCF11-202ENST00000528336 A0A0G2JPF8 293 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 HNRNPCL3B7ZW38 293 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 H3BQ06 376 aaPredicted RBP5.71□□□□□ -1.5
PCF11-202ENST00000528336 SH2B2O14492 632 aaPredicted RBP5.71□□□□□ -1.5
PCF11-202ENST00000528336 AP3D1O14617 1153 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 BEST1O76090 585 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 HNRNPCL4P0DMR1 293 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 TM4SF1P30408 202 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 CLCNKAP51800 687 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 FOXM1Q08050 763 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 NIPAL4Q0D2K0 466 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 STK4Q13043 487 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 IDI1Q13907 227 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 NAB2Q15742 525 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 KYNUQ16719 465 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 KCNT1Q5JUK3 1230 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 RAB12Q6IQ22 244 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 KLHL10Q6JEL2 608 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 FAM122CQ6P4D5 195 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 DCLRE1AQ6PJP8 1040 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 BEST3Q8N1M1 668 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms