RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 NCF1P14598 390 aaPredicted RBP12.34□□□□□ -0.43
TSKU-203ENST00000527881 ATF4P18848 351 aaPredicted RBP12.34□□□□□ -0.43
TSKU-203ENST00000527881 GGT5P36269 586 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 FCGRTP55899 365 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 SNRPD2P62316 118 aaKnown RBP12.34□□□□□ -0.43
TSKU-203ENST00000527881 STARD3Q14849 445 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 SOWAHCQ53LP3 525 aaPredicted RBP12.34□□□□□ -0.43
TSKU-203ENST00000527881 PXDC1Q5TGL8 231 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 HID1Q8IV36 788 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 P3H2Q8IVL5 708 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 RIMKLAQ8IXN7 391 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 LSMEM1Q8N8F7 131 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 DTX3Q8N9I9 347 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 OR2T12Q8NG77 320 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 SLC35F5Q8WV83 523 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 ATG4CQ96DT6 458 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 TBL1YQ9BQ87 522 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 KIFC1Q9BW19 673 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 UCKL1Q9NWZ5 548 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 RNF6Q9Y252 685 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 FAM72CH0Y354 149 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 SCO1O75880 301 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 KCNC1P48547 511 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 SP2Q02086 613 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 LRRC26Q2I0M4 334 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 GJC2Q5T442 439 aaPredicted RBP12.34□□□□□ -0.43
TSKU-203ENST00000527881 FAM72AQ5TYM5 149 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 FAM72DQ6L9T8 149 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 FAM72BQ86X60 149 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 SVOPLQ8N434 492 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 ANGPTL6Q8NI99 470 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 GTF2H4Q92759 462 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 PYCR2Q96C36 320 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 KIF12Q96FN5 646 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 EGLN2Q96KS0 407 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 RNF19AQ9NV58 838 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 FKBP14Q9NWM8 211 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 TRHDEQ9UKU6 1024 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 MICAL3Q7RTP6 2002 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 PABPN1LA6NDY0 278 aaKnown RBP12.34□□□□□ -0.43
TSKU-203ENST00000527881 ASB14A6NK59 587 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 B8ZZF3 427 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 SOX6P35712 828 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 CTSKP43235 329 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 HERVK_113P63132 956 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 MADCAM1Q13477 382 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 SYT6Q5T7P8 510 aaPredicted RBP12.34□□□□□ -0.43
TSKU-203ENST00000527881 TMEM199Q8N511 208 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 TRAPPC12Q8WVT3 735 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 ST6GAL2Q96JF0 529 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 HBEGFQ99075 208 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 MYOCQ99972 504 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 APOL4Q9BPW4 351 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 ERVK-6Q9BXR3 956 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 ITPAQ9BY32 194 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 RNF167Q9H6Y7 350 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 FBXL12Q9NXK8 326 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 DNMT3LQ9UJW3 386 aa12.34□□□□□ -0.43
TSKU-203ENST00000527881 MATN4O95460 622 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 CYP2A7P20853 494 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 CHRNA4P43681 627 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 ARHGDIAP52565 204 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 NRG1Q02297 640 aaPredicted RBP12.33□□□□□ -0.44
TSKU-203ENST00000527881 ADIGQ0VDE8 80 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 PLA2G4EQ3MJ16 856 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 ARMCX4Q5H9R4 360 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 HECTD2Q5U5R9 776 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 ZDHHC17Q8IUH5 632 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 KBTBD8Q8NFY9 601 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 OR10A6Q8NH74 314 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 LRRC20Q8TCA0 184 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 SLC38A4Q969I6 547 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 RNF34Q969K3 372 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 TRNT1Q96Q11 434 aaKnown RBP12.33□□□□□ -0.44
TSKU-203ENST00000527881 BTBD2Q9BX70 525 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 RCOR3Q9P2K3 495 aaPredicted RBP12.33□□□□□ -0.44
TSKU-203ENST00000527881 KCNH4Q9UQ05 1017 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 PEX16Q9Y5Y5 336 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 hCG_2039718K7EN88 272 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 IL7P13232 177 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 BMP1P13497 986 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 DNAJB1P25685 340 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 MATKP42679 507 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 DGKQP52824 942 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 PRKG2Q13237 762 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 SLAMF1Q13291 335 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 RBBP7Q16576 425 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 IER5Q5VY09 327 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 PRSS48Q7RTY5 328 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 MMP28Q9H239 520 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 DPEP3Q9H4B8 488 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 EXOSC4Q9NPD3 245 aaKnown RBP12.33□□□□□ -0.44
TSKU-203ENST00000527881 USP2O75604 605 aaPredicted RBP12.33□□□□□ -0.44
TSKU-203ENST00000527881 DCTP40126 519 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 RCAN2Q14206 197 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 SYPL2Q5VXT5 272 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 KCTD11Q693B1 232 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 XRRA1Q6P2D8 792 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 DPY19L3Q6ZPD9 716 aa12.33□□□□□ -0.44
TSKU-203ENST00000527881 PMEPA1Q969W9 287 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms