RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 PANX1Q96RD7 426 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 VPS25Q9BRG1 176 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 TUT1Q9H6E5 874 aaKnown RBP7.17□□□□□ -1.26
CTNND1-216ENST00000527467 USP18Q9UMW8 372 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 FADS2P1A8MWK0 482 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 OPLAHO14841 1288 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 SLC22A1O15245 554 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 TP73O15350 636 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 SH3BGRLO75368 114 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 PGLSO95336 258 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 RHOCP08134 193 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 GTF2F2P13984 249 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 IGFALSP35858 605 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 DPP6P42658 865 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 LIMK2P53671 638 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 PTENP60484 403 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 FAAP100Q0VG06 881 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 FGL2Q14314 439 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 COLEC12Q5KU26 742 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 VTCN1Q7Z7D3 282 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 ERI1Q8IV48 349 aaKnown RBP7.17□□□□□ -1.26
CTNND1-216ENST00000527467 STK40Q8N2I9 435 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 ESX1Q8N693 406 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 EFCAB3Q8N7B9 438 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 COQ8BQ96D53 544 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 MARK4Q96L34 752 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 ERGIC2Q96RQ1 377 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 MCCC1Q96RQ3 725 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-216ENST00000527467 CDCA3Q99618 268 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-216ENST00000527467 HOPXQ9BPY8 73 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-216ENST00000527467 LGR4Q9BXB1 951 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 BCO2Q9BYV7 579 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 SYT4Q9H2B2 425 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 MUC13Q9H3R2 512 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 SMURF1Q9HCE7 757 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 S100A14Q9HCY8 104 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 GFOD1Q9NXC2 390 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 QPCTLQ9NXS2 382 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 NINJ2Q9NZG7 142 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 PDP1Q9P0J1 537 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-216ENST00000527467 TUBE1Q9UJT0 475 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 VPS28Q9UK41 221 aa7.17□□□□□ -1.26
CTNND1-216ENST00000527467 C14orf166Q9Y224 244 aaKnown RBP7.17□□□□□ -1.26
CTNND1-216ENST00000527467 FAM237BA0A1B0GVD1 139 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 BBIP1A8MTZ0 92 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 C12orf71A8MTZ7 269 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF705GA8MUZ8 300 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 DDX3XO00571 662 aaKnown RBP eCLIP7.16□□□□□ -1.262e-13■□□□□ 9.3
CTNND1-216ENST00000527467 SLC28A2O43868 658 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ITGB3P05106 788 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 SLC2A5P22732 501 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 RBL1P28749 1068 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 CCR1P32246 355 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MAGEA11P43364 429 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 SLC15A1P46059 708 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 PLK1P53350 603 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 CRADDP78560 199 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 FMR1Q06787 632 aaKnown RBP eCLIP7.16□□□□□ -1.261e-6■■■■□ 23.3
CTNND1-216ENST00000527467 XKR3Q5GH77 459 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 VWA5B1Q5TIE3 1220 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 OGFOD2Q6N063 350 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF730Q6ZMV8 503 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 UBQLNLQ8IYU4 475 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 OR51D1Q8NGF3 324 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 HELQQ8TDG4 1101 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 OXER1Q8TDS5 423 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 BORCS7Q96B45 105 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 RCN3Q96D15 328 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 TBC1D17Q9HA65 648 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MOCS1Q9NZB8 636 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 HMGXB4Q9UGU5 601 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 PACSIN3Q9UKS6 424 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 TRAF6Q9Y4K3 522 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 CAPN8A6NHC0 703 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 TULP2O00295 520 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 RFXANKO14593 260 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 SGCEO43556 437 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ASLP04424 464 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 CDH11P55287 796 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 NECTIN1Q15223 517 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 TLR1Q15399 786 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 TMEM44Q2T9K0 475 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ASB18Q6ZVZ8 466 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF627Q7L945 461 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 CYP4X1Q8N118 509 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF808Q8N4W9 903 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 OR2T12Q8NG77 320 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 OR7D4Q8NG98 312 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MTFMTQ96DP5 389 aaKnown RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 PRRG4Q9BZD6 226 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 C3orf14Q9HBI5 128 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 TLR8Q9NR97 1041 aaKnown RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MTMR4Q9NYA4 1195 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 WASF3Q9UPY6 502 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 PDE10AQ9Y233 779 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 PCDHA11Q9Y5I1 949 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ANKRD26Q9UPS8 1709 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 TEX13CA0A0J9YWL9 993 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 A0A1W2PRQ8 180 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 WDR27A2RRH5 827 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms