RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 PRRG1O14668 218 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 NPHS1O60500 1241 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 TOMM70O94826 608 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 KRT6AP02538 564 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 KRT6BP04259 564 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 MMP3P08254 477 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 ALDOCP09972 364 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 COX7A2P14406 83 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF26P17031 533 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 KRT6CP48668 564 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 KCNQ1P51787 676 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 HERVK_113P63132 956 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 ZXDBP98169 803 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 RELAQ04206 551 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 NPTX1Q15818 432 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 CCL14Q16627 93 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 PDE12Q6L8Q7 609 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 UGT3A1Q6NUS8 523 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 PLEKHH3Q7Z736 793 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 ITIH5Q86UX2 942 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 DCP1BQ8IZD4 617 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 GANCQ8TET4 914 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 SERPINB11Q96P15 392 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 KCNC2Q96PR1 638 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 MTERF1Q99551 399 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 HEPHQ9BQS7 1158 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 ERVK-6Q9BXR3 956 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 NSUN3Q9H649 340 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 NMUR1Q9HB89 426 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 ERVK-18Q9QC07 812 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 TRPC4Q9UBN4 977 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 SH3PXD2BA1X283 911 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 FAM25AB3EWG3 89 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 FAM25CB3EWG5 89 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 FAM25GB3EWG6 89 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 DCLK1O15075 740 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 TMCC2O75069 709 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 CLPXO76031 633 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 APOL3O95236 402 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 CD36P16671 472 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 SMARCB1Q12824 385 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 ABRQ12979 859 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 TRIM32Q13049 653 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 HNRNPDQ14103 355 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 DAG1Q14118 895 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 SF1Q15637 639 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 RFX4Q33E94 735 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF678Q5SXM1 525 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 C1QTNF12Q5T7M4 302 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 PPP4R4Q6NUP7 873 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 TMEM53Q6P2H8 277 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 DOK6Q6PKX4 331 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 AKAP14Q86UN6 197 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 GPR180Q86V85 440 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 P2RY8Q86VZ1 359 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 AMER2Q8N7J2 671 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 SETD9Q8NE22 299 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 TP53INP1Q96A56 240 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 CIPCQ9C0C6 399 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 HDHD2Q9H0R4 259 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 ABHD16BQ9H3Z7 469 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 TRPV5Q9NQA5 729 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 EIF2B3Q9NR50 452 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 SPATA2Q9UM82 520 aa6.86□□□□□ -1.31
TGFBR3-207ENST00000525962 ELOVL7A1L3X0 281 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 KRT87PA6NCN2 255 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 ARL5CA6NH57 179 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 CENPXA8MT69 81 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 LOC110117498-PIK3R3F6TDL0 507 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 SERPINI2O75830 405 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 SLC25A14O95258 325 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 DNTTP04053 509 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 CSF2P04141 144 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 COL6A2P12110 1019 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 FSHRP23945 695 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 HOXA11P31270 313 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 RCVRNP35243 200 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 SLC11A2P49281 568 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 CLCN2P51788 898 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 PRKAG1P54619 331 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 ARSFP54793 590 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 NFATC3Q12968 1075 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 SMN1Q16637 294 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF829Q3KNS6 432 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 TECRLQ5HYJ1 363 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 CCDC149Q6ZUS6 474 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 GPR65Q8IYL9 337 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 NLGN2Q8NFZ4 835 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 ENKURQ8TC29 256 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 RPL3LQ92901 407 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 TOP1MTQ969P6 601 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 GFM1Q96RP9 751 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 FUNDC2Q9BWH2 189 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 TNKS2Q9H2K2 1166 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 RPF2Q9H7B2 306 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 PSME2Q9UL46 239 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 PADI4Q9UM07 663 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 NME7Q9Y5B8 376 aa6.85□□□□□ -1.31
TGFBR3-207ENST00000525962 HS3ST4Q9Y661 456 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms