RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CFAP99D6REC4 459 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 H7C0S8 307 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 UBXN7O94888 489 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 MSNP26038 577 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 ACRV1P26436 265 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 LEPRP48357 1165 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 CACNG1Q06432 222 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 SRSF6Q13247 344 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 TRIP13Q15645 432 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 DBN1Q16643 649 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 SKIDA1Q1XH10 827 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 BCL7AQ4VC05 210 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 ARHGAP40Q5TG30 622 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 TMEM164Q5U3C3 297 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 DRICH1Q6PGQ1 229 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 XKR5Q6UX68 686 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 ARHGAP22Q7Z5H3 698 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 CLDN19Q8N6F1 224 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 PRELID2Q8N945 189 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 OR2L2Q8NH16 312 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 RSC1A1Q92681 617 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 HDAC10Q969S8 669 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 C12orf66Q96MD2 445 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 ZNF778Q96MU6 729 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 TGM7Q96PF1 710 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 TAAR9Q96RI9 348 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 CTRCQ99895 268 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 C19orf43Q9BQ61 176 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 KCNF1Q9H3M0 494 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 UCK1Q9HA47 277 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 CASS4Q9NQ75 786 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 SLC39A1Q9NY26 324 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 NBEAQ8NFP9 2946 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 CFAP47Q6ZTR5 3102 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 HEATR9A2RTY3 570 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 CAPN5O15484 640 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 MTHFD1P11586 935 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 ADRA1DP25100 572 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 PRLHRP49683 370 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 TMPRSS3P57727 454 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 SESN2P58004 480 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 BASP1P80723 227 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 GSE1Q14687 1217 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 TSTD2Q5T7W7 516 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 ANKS6Q68DC2 871 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 PLXDC1Q8IUK5 500 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 SLC35F6Q8N357 371 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 HEXDCQ8WVB3 486 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 RNF31Q96EP0 1072 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 LINC00615Q96LM1 132 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 AP1M1Q9BXS5 423 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 EPB41L1Q9H4G0 881 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 SMARCAL1Q9NZC9 954 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 ZKSCAN5Q9Y2L8 839 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 JRKLQ9Y4A0 524 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 B3GALT1Q9Y5Z6 326 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 PRSS21Q9Y6M0 314 aa12.57□□□□□ -0.4
TRAPPC4-205ENST00000525079 ZFHX4Q86UP3 3567 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 IGLV3-16A0A075B6K0 115 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 KIF1CO43896 1103 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 GOT2P00505 430 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 SLC35G4P0C7Q5 338 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 PSMA3P25788 255 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 FOXN2P32314 431 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 VPS41P49754 854 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 SEPHS1P49903 392 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 PPP1CAP62136 330 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 CRADDP78560 199 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 PLCL1Q15111 1095 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 IRGCQ6NXR0 463 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 TTC27Q6P3X3 843 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 FAM92BQ6ZTR7 304 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 GPR155Q7Z3F1 870 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 VASH2Q86V25 355 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 RBM12BQ8IXT5 1001 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 BMPERQ8N8U9 685 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 OR13J1Q8NGT2 312 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 HM13Q8TCT9 377 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 PBKQ96KB5 322 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 C9orf72Q96LT7 481 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 RMDN2Q96LZ7 410 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 BBC3Q96PG8 261 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 RANBP9Q96S59 729 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 CCM2Q9BSQ5 444 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 APMAPQ9HDC9 416 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 ACSL5Q9ULC5 683 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 TTC7AQ9ULT0 858 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 TCAF1Q9Y4C2 921 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 CELSR3Q9NYQ7 3312 aa12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 MN1Q10571 1320 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-205ENST00000525079 TCRBV7S3A2A0A539 114 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 B4E171 279 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 EFSO43281 561 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 ZSCAN12O43309 604 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 RASSF9O75901 435 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 C9P02748 559 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 LIPCP11150 499 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 PDHA2P29803 388 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 TSPAN7P41732 249 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms