RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 GRHL2Q6ISB3 625 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 ZNF549Q6P9A3 640 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 C17orf99Q6UX52 265 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 PPP1R21Q6ZMI0 780 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 GLDNQ6ZMI3 551 aaPredicted RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 CFAP77Q6ZQR2 320 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 RGS9BPQ6ZS82 235 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 MSANTD1Q6ZTZ1 278 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 PLEKHM3Q6ZWE6 761 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 LPCAT2Q7L5N7 544 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 CAMKMTQ7Z624 323 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 ADCK1Q86TW2 530 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 FOXP4Q8IVH2 680 aaPredicted RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 ZNF34Q8IZ26 560 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 TTC5Q8N0Z6 440 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 CAMKVQ8NCB2 501 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 CNNM3Q8NE01 707 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 PSPC1Q8WXF1 523 aaKnown RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 CTNNBL1Q8WYA6 563 aaPredicted RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 GTF3C6Q969F1 213 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 FAR2Q96K12 515 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 THUMPD2Q9BTF0 503 aaKnown RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 KIFC3Q9BVG8 833 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 PLK3Q9H4B4 646 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 SLC22A11Q9NSA0 550 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 SETD4Q9NVD3 440 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 CYP39A1Q9NYL5 469 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 NCKIPSDQ9NZQ3 722 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 ABI3Q9P2A4 366 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 CRNNQ9UBG3 495 aaPredicted RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 AMACRQ9UHK6 382 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 MTMR6Q9Y217 621 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.3□□□□□ -1.72
PCM1-223ENST00000524356 RAD54BQ9Y620 910 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 ABCC4O15439 1325 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 KIF7Q2M1P5 1343 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 A0A1W2PR77 199 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 KDM4EB2RXH2 506 aaPredicted RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 B4DGG1 531 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 EIF3CLB5ME19 914 aaKnown RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 CCDC188H7C350 402 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 CACNB4O00305 520 aaPredicted RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 MCF2LO15068 1137 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 PPM1DO15297 605 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 SLC25A17O43808 307 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 SLC28A2O43868 658 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 TSC22D2O75157 780 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 TRIM16O95361 564 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 IPO7O95373 1038 aaKnown RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 CYP3A4P08684 503 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 PON1P27169 355 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 ANP32AP39687 249 aaKnown RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 ATXN3P54252 364 aaPredicted RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 F2RL1P55085 397 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 ARF5P84085 180 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 ARHGAP8P85298 464 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 SATB1Q01826 763 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 TEFQ10587 303 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 RALGDSQ12967 914 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 IKQ13123 557 aaPredicted RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 PDK1Q15118 436 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 GSTA3Q16772 222 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 C15orf59Q2T9L4 293 aaPredicted RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 AP5B1Q2VPB7 878 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 KRT71Q3SY84 523 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 IGSF11Q5DX21 431 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 TEDDM1Q5T9Z0 273 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 RGS7BPQ6MZT1 257 aaPredicted RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 TSSK4Q6SA08 328 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 Q7L0L9 218 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 TMEM200AQ86VY9 491 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 SLC15A3Q8IY34 581 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 GMCL1P1Q8NEA9 526 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 ZNF548Q8NEK5 533 aaPredicted RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 CD99L2Q8TCZ2 262 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 TEKT4Q8WW24 435 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 SLC13A3Q8WWT9 602 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 PRCCQ92733 491 aaPredicted RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 KCNJ9Q92806 393 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 PTERQ96BW5 349 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 DCPSQ96C86 337 aaKnown RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 ERO1AQ96HE7 468 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 FAM111AQ96PZ2 611 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 NPAS1Q99742 590 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 UTP14AQ9BVJ6 771 aaKnown RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 NUP85Q9BW27 656 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 FSD1LQ9BXM9 530 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 FAM234AQ9H0X4 552 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 HRH4Q9H3N8 390 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 VPS37BQ9H9H4 285 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 IARS2Q9NSE4 1012 aaKnown RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 HOXC10Q9NYD6 342 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 IL1RAPL1Q9NZN1 696 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 KLQ9UEF7 1012 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 ARMCX3Q9UH62 379 aaPredicted RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 RPH3AQ9Y2J0 694 aaPredicted RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 COPG1Q9Y678 874 aaKnown RBP4.29□□□□□ -1.72
PCM1-223ENST00000524356 TTC28Q96AY4 2481 aa4.29□□□□□ -1.72
PCM1-223ENST00000524356 CLRN2A0PK11 232 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms