RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 REEP2Q9BRK0 252 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 MXRA8Q9BRK3 442 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 ZNF577Q9BSK1 485 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 TCHPQ9BT92 498 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 TIPINQ9BVW5 301 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 OSBPL10Q9BXB5 764 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 HDHD5Q9BXW7 423 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 TRIM31Q9BZY9 425 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 WDR12Q9GZL7 423 aaKnown RBP3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 TMEM39BQ9GZU3 492 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 SYNCQ9H7C4 482 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 VIPAS39Q9H9C1 493 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 EBF2Q9HAK2 575 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 PARVGQ9HBI0 331 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 PDE11AQ9HCR9 933 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 KRCC1Q9NPI7 259 aaPredicted RBP3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 PNRC2Q9NPJ4 139 aaKnown RBP3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 PLCB1Q9NQ66 1216 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 TBC1D22BQ9NU19 505 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 COMMD8Q9NX08 183 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 UBAP1Q9NZ09 502 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 NCKIPSDQ9NZQ3 722 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 PLXNA1Q9UIW2 1896 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 FBXL5Q9UKA1 691 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 BAG5Q9UL15 447 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 CCPG1Q9ULG6 757 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 GUCA1BQ9UMX6 200 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 DTX4Q9Y2E6 619 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 PKP3Q9Y446 797 aa3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 BZW2Q9Y6E2 419 aaKnown RBP3.4□□□□□ -1.87
LINCR-0001-203ENST00000524047 ANK1P16157 1881 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 GOLGA6L10A0A0M3HER8 536 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 ARHGEF35A5YM69 484 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 LRRC53A6NM62 1247 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 SRRM3A6NNA2 597 aaPredicted RBP3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 BTNL10A8MVZ5 291 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 C19orf81C9J6K1 198 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 ANKRD65E5RJM6 399 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 SYT5O00445 386 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 ACKR2O00590 384 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 BIRC5O15392 142 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 DKC1O60832 514 aaKnown RBP eCLIP3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 SMIM24O75264 130 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 TACC1O75410 805 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 STAM2O75886 525 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 GFPT2O94808 682 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 NOL4O94818 638 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 TMCC1O94876 653 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 SEC31AO94979 1220 aaKnown RBP3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 LYPLA2O95372 231 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 GCNT3O95395 438 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 AFPP02771 609 aaKnown RBP3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 NR3C1P04150 777 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 VIMP08670 466 aaKnown RBP3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 LINGO3P0C6S8 592 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 TGFB3P10600 412 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 TCP1P17987 556 aaKnown RBP3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 ALDH3A1P30838 453 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 SFNP31947 248 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 CA8P35219 290 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 PSMC2P35998 433 aaKnown RBP3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 MAGEA1P43355 309 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 CCT5P48643 541 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 KLK7P49862 253 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 CYP2J2P51589 502 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 ZNF131P52739 623 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 OAZ1P54368 228 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 PSMC6P62333 389 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 AP2B1P63010 937 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 TUBA1BP68363 451 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 CTAG1AP78358 180 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 RHAGQ02094 409 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 CYP4A11Q02928 519 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 ZBTB16Q05516 673 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 CBX3Q13185 183 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 RIPK1Q13546 671 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 SLC18A3Q16572 532 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 ASTE1Q2TB18 679 aaPredicted RBP3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 GALNTL6Q49A17 601 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 SMUG1Q53HV7 270 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 BOLA3Q53S33 107 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 FAM171A1Q5VUB5 890 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 LIN54Q6MZP7 749 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 C18orf65Q6ZTR6 163 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 C1orf186Q6ZWK4 172 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 TUBA1AQ71U36 451 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 RRAGAQ7L523 313 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 MIER3Q7Z3K6 550 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 MAATS1Q7Z4T9 603 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 SFR1Q86XK3 245 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 APOBEC3FQ8IUX4 373 aaKnown RBP3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 NELFCDQ8IXH7 590 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 C12orf56Q8IXR9 622 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 FAM217AQ8IXS0 508 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 SCYL3Q8IZE3 742 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 SLC7A5P1Q8MH63 180 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 DPP10Q8N608 796 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 MYCT1Q8N699 235 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 LRRC57Q8N9N7 239 aa3.39□□□□□ -1.87
LINCR-0001-203ENST00000524047 C1orf131Q8NDD1 294 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms