RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 AAR2Q9Y312 384 aaKnown RBP12.37□□□□□ -0.43
TOP1MT-217ENST00000523417 PCDHA3Q9Y5H8 950 aa12.37□□□□□ -0.43
TOP1MT-217ENST00000523417 OR5K3A6NET4 321 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 BTNL10A8MVZ5 291 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 PYCARD-AS1I3L0S3 204 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 SGTAO43765 313 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 KIAA0754O94854 1291 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 MTHFD1P11586 935 aaKnown RBP12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 MSH3P20585 1137 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 RBL1P28749 1068 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 CTNNA1P35221 906 aaKnown RBP12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 DLSTP36957 453 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 ACY1Q03154 408 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 SEPT6Q14141 434 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 NFE2L1Q14494 772 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 DEFB109BQ30KR1 87 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 CAPRIN2Q6IMN6 1127 aaKnown RBP12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 IRGCQ6NXR0 463 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 ZNF517Q6ZMY9 492 aaPredicted RBP12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 FAM92BQ6ZTR7 304 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 RASGRP3Q8IV61 690 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 GALNT6Q8NCL4 622 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 IPMKQ8NFU5 416 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 HEXDCQ8WVB3 486 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 SEC14L1Q92503 715 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 KRT35Q92764 455 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 PPP1R2P1Q96PQ5 205 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 INSM2Q96T92 566 aaPredicted RBP12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 FERMT1Q9BQL6 677 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 CCM2Q9BSQ5 444 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 LUC7LQ9NQ29 371 aaKnown RBP12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 LHX9Q9NQ69 397 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 TRIM10Q9UDY6 481 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 RSPH14Q9UHP6 348 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 FEZ2Q9UHY8 353 aaPredicted RBP12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 CROTQ9UKG9 612 aa12.36□□□□□ -0.43
TOP1MT-217ENST00000523417 BOD1L1Q8NFC6 3051 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 UBR5O95071 2799 aaPredicted RBP12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 TLCD2A6NGC4 264 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 OR2AG2A6NM03 316 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 CREG1O75629 220 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 SRP72O76094 671 aaKnown RBP12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 MSL3P1P0C860 447 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 PRKAR1AP10644 381 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 FOLR1P15328 257 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 NDUFS1P28331 727 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 MARCKSL1P49006 195 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 HSD11B2P80365 405 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 FOXK1P85037 733 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 LLGL1Q15334 1064 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 SPA17Q15506 151 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 ANKRD20A2Q5SQ80 823 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 ANKRD20A1Q5TYW2 823 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 ANKRD20A3Q5VUR7 823 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 DENND5AQ6IQ26 1287 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 PWWP2BQ6NUJ5 590 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 APLFQ8IW19 511 aaPredicted RBP12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 SIDT2Q8NBJ9 832 aaKnown RBP12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 OR4K2Q8NGD2 314 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 ACTL9Q8TC94 416 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 COL26A1Q96A83 441 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 STAMBPL1Q96FJ0 436 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 LRFN5Q96NI6 719 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 MAP3K3Q99759 626 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 HEMGNQ9BXL5 484 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 FSD1LQ9BXM9 530 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 GOLPH3Q9H4A6 298 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 KIR3DX1Q9H7L2 352 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 LATS2Q9NRM7 1088 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 HRASLS2Q9NWW9 162 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 SLC24A2Q9UI40 661 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 RARRES3Q9UL19 164 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 POLHQ9Y253 713 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 ARL5AQ9Y689 179 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 COLEC10Q9Y6Z7 277 aa12.35□□□□□ -0.43
TOP1MT-217ENST00000523417 CCDC66A2RUB6 948 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 CLEC18AA5D8T8 446 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 H7C0C1 242 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 BUD23O43709 281 aaKnown RBP12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 PRAMEF1O95521 474 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 CRTAMO95727 393 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 PSMA3P25788 255 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 CTNNA2P26232 953 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 CYLC1P35663 651 aaPredicted RBP12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 ATP5OP48047 213 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 TUBB4BP68371 445 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 TUBB3Q13509 450 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 DNASE1L3Q13609 305 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 LAMB3Q13751 1172 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 PRPSAP1Q14558 356 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 PTPRCAPQ14761 206 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 SKIDA1Q1XH10 827 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 GPR33Q49SQ1 333 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 ZNF658BQ4V348 819 aaPredicted RBP12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 FNBP1LQ5T0N5 605 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 C16orf46Q6P387 395 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 CLEC18BQ6UXF7 455 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 DAAM2Q86T65 1068 aa12.34□□□□□ -0.43
TOP1MT-217ENST00000523417 PTRH1Q86Y79 214 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms