RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-215	ENST00000522275	EBF4	Q9BQW3	602 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	C1QTNF6	Q9BXI9	259 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ANKRD19P	Q9H560	264 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	TDRD3	Q9H7E2	651 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	NIPAL2	Q9H841	368 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	SSU72	Q9NP77	194 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	SLAMF7	Q9NQ25	335 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ANKEF1	Q9NU02	776 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	TBC1D13	Q9NVG8	400 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	BFAR	Q9NZS9	450 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	PISD	Q9UG56	409 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	BTBD3	Q9Y2F9	522 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	PEX16	Q9Y5Y5	336 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	FKBP7	Q9Y680	259 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275		U3KQV3	271 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	AKAP11	Q9UKA4	1901 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	MADD	Q8WXG6	1647 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275		A0A0G2JLW4	131 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	SOCS2	O14508	198 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	TRIM24	O15164	1050 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	GSTA4	O15217	222 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	TOX3	O15405	576 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	NPHS1	O60500	1241 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ATG12	O94817	140 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	CBX7	O95931	251 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	RLN2	P04090	185 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ARF4	P18085	180 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	PTBP1	P26599	531 aa	Known RBP eCLIP	4.6	□□□□□ -1.67	1e-6	■□□□□ 9.6
PCM1-215	ENST00000522275	GGT5	P36269	586 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	COIL	P38432	576 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	RAP1GAP	P47736	663 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	UGT2B15	P54855	530 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ABAT	P80404	500 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	TFAM	Q00059	246 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	CAV1	Q03135	178 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	MERTK	Q12866	999 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	RBMS2	Q15434	407 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	CCDC142	Q17RM4	750 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ADPRM	Q3LIE5	342 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ZNF528	Q3MIS6	628 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	SLC36A3	Q495N2	470 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	CRTC2	Q53ET0	693 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	AKIRIN2	Q53H80	203 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	MTX3	Q5HYI7	312 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	CLLU1	Q5K131	121 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	COLEC12	Q5KU26	742 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ACER2	Q5QJU3	275 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	SPOUT1	Q5T280	376 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	MEDAG	Q5VYS4	303 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	C11orf88	Q6PI97	169 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ZNF773	Q6PK81	442 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	DPP8	Q6V1X1	898 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	MEX3B	Q6ZN04	569 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ANKS1B	Q7Z6G8	1248 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	RASAL3	Q86YV0	1011 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	EPHX4	Q8IUS5	362 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	MCAT	Q8IVS2	390 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	FAM217A	Q8IXS0	508 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ZZZ3	Q8IYH5	903 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	CENPL	Q8N0S6	344 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	EFHB	Q8N7U6	833 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	WDSUB1	Q8N9V3	476 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ZMIZ2	Q8NF64	920 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	OR1M1	Q8NGA1	313 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	OR13J1	Q8NGT2	312 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	CLHC1	Q8NHS4	586 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	RNASE11	Q8TAA1	199 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	WFIKKN2	Q8TEU8	576 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	TFB1M	Q8WVM0	346 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	KIAA1191	Q96A73	305 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	NXPE2	Q96DL1	559 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ATG4C	Q96DT6	458 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	CMTM5	Q96DZ9	223 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	FAM122A	Q96E09	287 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ELMO2	Q96JJ3	720 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	MEGF10	Q96KG7	1140 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ADI1	Q9BV57	179 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ANO3	Q9BYT9	981 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	PRKD2	Q9BZL6	878 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	PPIL3	Q9H2H8	161 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ADAMTS10	Q9H324	1103 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	NOL11	Q9H8H0	719 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	TLR9	Q9NR96	1032 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	ERAP1	Q9NZ08	941 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	NDUFAF4	Q9P032	175 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	IFT80	Q9P2H3	777 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	MARCO	Q9UEW3	520 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	CD300A	Q9UGN4	299 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	CDY2A	Q9Y6F7	541 aa		4.6	□□□□□ -1.67
PCM1-215	ENST00000522275	MET	P08581	1390 aa		4.59	□□□□□ -1.67
PCM1-215	ENST00000522275	NEURL4	Q96JN8	1562 aa		4.59	□□□□□ -1.67
PCM1-215	ENST00000522275	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.59	□□□□□ -1.67
PCM1-215	ENST00000522275	NCAPD2	Q15021	1401 aa		4.59	□□□□□ -1.67
PCM1-215	ENST00000522275	FAM234B	A2RU67	622 aa		4.59	□□□□□ -1.67
PCM1-215	ENST00000522275	DENND3	A2RUS2	1198 aa		4.59	□□□□□ -1.67
PCM1-215	ENST00000522275	AGAP5	A6NIR3	686 aa		4.59	□□□□□ -1.67

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