RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PTGFRNQ9P2B2 879 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 IRAK2O43187 625 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 CAPN13Q6MZZ7 669 aaPredicted RBP13.66□□□□□ -0.22
SYNPO-205ENST00000522122 TMEM214Q6NUQ4 689 aaKnown RBP13.66□□□□□ -0.22
SYNPO-205ENST00000522122 FAM20CQ8IXL6 584 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 FBXO27Q8NI29 283 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 PNPT1Q8TCS8 783 aaKnown RBP13.66□□□□□ -0.22
SYNPO-205ENST00000522122 ACAT2Q9BWD1 397 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 TUBA8Q9NY65 449 aaPredicted RBP13.66□□□□□ -0.22
SYNPO-205ENST00000522122 KIF13BQ9NQT8 1826 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 BTAF1O14981 1849 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 NBNO60934 754 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 SERPINA1P01009 418 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 CAPGP40121 348 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 FLT3LGP49771 235 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 SKP1P63208 163 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 ZSWIM7Q19AV6 140 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 OR10A6Q8NH74 314 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 NODALQ96S42 347 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 GMLQ99445 158 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 ZNF510Q9Y2H8 683 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 H0YC42 278 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 DUSP11O75319 330 aaKnown RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 PENKP01210 267 aaPredicted RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 ELFN1P0C7U0 828 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 BMP7P18075 431 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 IMPDH1P20839 514 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 PTGER3P43115 390 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 LSAMPQ13449 338 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 CSGALNACT1Q8TDX6 532 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 COX4I2Q96KJ9 171 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 ZNF696Q9H7X3 374 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 FKBPLQ9UIM3 349 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 CCDC182A6NF36 153 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 AQP12BA6NM10 295 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 C1QTNF3-AMACRE9PGA6 284 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 HAT1O14929 419 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 MANFP55145 182 aaKnown RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 GALNT18Q6P9A2 607 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 DEF8Q6ZN54 512 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 CIR1Q86X95 450 aaPredicted RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 AQP12AQ8IXF9 295 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 RHBGQ9H310 441 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 ZDHHC7Q9NXF8 308 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 MRPS7Q9Y2R9 242 aaKnown RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 COL4A1P02462 1669 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 UGT2B4P06133 528 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 ADH1AP07327 375 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 MAGEA6P43360 314 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 ATP12AP54707 1039 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 TUBA4AP68366 448 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 EGFLAMQ63HQ2 1017 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 ATG14Q6ZNE5 492 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 RAVER1Q8IY67 606 aaKnown RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 SCAMP5Q8TAC9 235 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 OMA1Q96E52 524 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 ATG10Q9H0Y0 220 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 TFB2MQ9H5Q4 396 aaKnown RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 INTS10Q9NVR2 710 aaKnown RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 RBPJLQ9UBG7 517 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 AP3D1O14617 1153 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 FPGTO14772 594 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 PCSK2P16519 638 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 CKMT2P17540 419 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 SP3Q02447 781 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 CREMQ03060 361 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 ZC3HC1Q86WB0 502 aaKnown RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 ERLEC1Q96DZ1 483 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 PIWIL1Q96J94 861 aaKnown RBP13.65□□□□□ -0.22
SYNPO-205ENST00000522122 TRIM17Q9Y577 477 aa13.65□□□□□ -0.22
SYNPO-205ENST00000522122 H0Y858 1186 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 FYNP06241 537 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 SRP54P61011 504 aaKnown RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 SULT2A1Q06520 285 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 SLC34A3Q8N130 599 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 ARFGAP1Q8N6T3 406 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 DRAXINQ8NBI3 349 aaPredicted RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 PRDM8Q9NQV8 689 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 PDE10AQ9Y233 779 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 DGKBQ9Y6T7 804 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 A0A0G2JLL6 359 aaPredicted RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 PRPS2P11908 318 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 BUD31P41223 144 aaPredicted RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 COPZ1P61923 177 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 NAE1Q13564 534 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 TIGD5Q53EQ6 642 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 SULT1C3Q6IMI6 304 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 PRRT2Q7Z6L0 340 aaPredicted RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 PIH1D2Q8WWB5 315 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 TRMT13Q9NUP7 481 aaKnown RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 MRPS23Q9Y3D9 190 aaKnown RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 ZFP37Q9Y6Q3 630 aaPredicted RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 KAT6AQ92794 2004 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 SLC28A2O43868 658 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 DLX3O60479 287 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 CDK14O94921 469 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 FABP3P05413 133 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms