RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SLAMF9Q96A28 289 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MIB2Q96AX9 1013 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 STAMBPL1Q96FJ0 436 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FAM81BQ96LP2 452 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 RUNDC3BQ96NL0 473 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PCYT2Q99447 389 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SEPHS2Q99611 448 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 HNRNPABQ99729 332 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CPNE1Q99829 537 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ZNF747Q9BV97 191 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 GTPBP2Q9BX10 602 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MOV10L1Q9BXT6 1211 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 WNT5BQ9H1J7 359 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TNMDQ9H2S6 317 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MINDY3Q9H8M7 445 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TUFT1Q9NNX1 390 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MYNNQ9NPC7 610 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CPSF3Q9UKF6 684 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PADI2Q9Y2J8 665 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SRPRBQ9Y5M8 271 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 POLR2AP24928 1970 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 A0A087X1B8 175 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PRSS51A0A1B0GVH4 220 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SMIM35A0A1B0GVV1 85 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TMEM221A6NGB7 291 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 C5orf52A6NGY3 159 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 YDJCA8MPS7 323 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FAM90A26D6RGX4 464 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 I6L893 689 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 WNT9BO14905 357 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FOXN1O15353 648 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ITM2AO43736 263 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 VEGFDO43915 354 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 NDUFS7O75251 213 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MED24O75448 989 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 BCAS2O75934 225 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 VNN2O95498 520 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CD22P20273 847 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 UGT1A1P22309 533 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PROZP22891 400 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ACAT1P24752 427 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MPZP25189 248 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 WNT5AP41221 380 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SNU13P55769 128 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 HNRNPH2P55795 449 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 POLR2FP61218 127 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TTC31Q49AM3 519 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SETMARQ53H47 684 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TCTE1Q5JU00 501 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 Q5PR19 223 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 DCAF12L2Q5VW00 463 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 C18orf63Q68DL7 685 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 WDR73Q6P4I2 378 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SLC27A1Q6PCB7 646 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 DLK2Q6UY11 383 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 NHLRC1Q6VVB1 395 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 BTN2A1Q7KYR7 527 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ZNF367Q7RTV3 350 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SLC9B2Q86UD5 537 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CNTN4Q8IWV2 1026 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CLYBLQ8N0X4 340 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 AADATQ8N5Z0 425 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SEMA6DQ8NFY4 1073 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 OR7G3Q8NG95 312 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 LILRB1Q8NHL6 650 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 C9orf43Q8TAL5 461 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TMEM163Q8TC26 289 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SLC44A1Q8WWI5 657 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 INPP5DQ92835 1189 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ZFYVE19Q96K21 471 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SPATA33Q96N06 139 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SFXN2Q96NB2 322 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ZNF582Q96NG8 517 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SLC22A12Q96S37 553 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CMKLR1Q99788 373 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 KXD1Q9BQD3 176 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TRIM7Q9C029 511 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SEMA6AQ9H2E6 1030 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FN3KQ9H479 309 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TASP1Q9H6P5 420 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 C17orf75Q9HAS0 396 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 LMAN1LQ9HAT1 526 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 DNAJC17Q9NVM6 304 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MCM9Q9NXL9 1143 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 DPP3Q9NY33 737 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FLRT1Q9NZU1 646 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TBC1D7Q9P0N9 293 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 LEF1Q9UJU2 399 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FBXL2Q9UKC9 423 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MTF2Q9Y483 593 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ACEP12821 1306 aa3.18□□□□□ -1.9
SCARNA15.2-201ENST00000516409 A0A0A6YYC8 382 aaPredicted RBP3.17□□□□□ -1.9
SCARNA15.2-201ENST00000516409 A0A1W2PPQ1 181 aa3.17□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CCDC69A6NI79 296 aa3.17□□□□□ -1.9
SCARNA15.2-201ENST00000516409 C1QTNF3-AMACRE9PGA6 284 aa3.17□□□□□ -1.9
SCARNA15.2-201ENST00000516409 I3L1I5 382 aaPredicted RBP3.17□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SOCS6O14544 535 aa3.17□□□□□ -1.9
SCARNA15.2-201ENST00000516409 KCNN4O15554 427 aa3.17□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ASAP2O43150 1006 aa3.17□□□□□ -1.9
SCARNA15.2-201ENST00000516409 OR10H2O60403 315 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms