RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	UNC50	Q53HI1	259 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	SH2D4B	Q5SQS7	431 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	ZNF776	Q68DI1	518 aa	Predicted RBP	11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	SDE2	Q6IQ49	451 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	TTC23L	Q6PF05	361 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	ATG14	Q6ZNE5	492 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	RFLNA	Q6ZTI6	216 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	MAVS	Q7Z434	540 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	BMP8A	Q7Z5Y6	402 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	MMAA	Q8IVH4	418 aa	Known RBP	11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	CHPF	Q8IZ52	775 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	PLCD3	Q8N3E9	789 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	CHCHD4	Q8N4Q1	142 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	CLDN19	Q8N6F1	224 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	PDPR	Q8NCN5	879 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	LKAAEAR1	Q8TD35	194 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	KLHL29	Q96CT2	875 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	CNTNAP3B	Q96NU0	1288 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	EBF4	Q9BQW3	602 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	CNTNAP3	Q9BZ76	1288 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	NMUR2	Q9GZQ4	415 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	LRMDA	Q9H2I8	198 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	RDH14	Q9HBH5	336 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	TCF7L2	Q9NQB0	619 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	CACNA2D2	Q9NY47	1150 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	CD274	Q9NZQ7	290 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	ZDHHC2	Q9UIJ5	367 aa		11.77	□□□□□ -0.53
LMNA-224	ENST00000515711	DMD	P11532	3685 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	FADS2P1	A8MWK0	482 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	SPECC1L-ADORA2A	F8WAN1	911 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	GIPC1	O14908	333 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	SLC16A5	O15375	505 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	TSPAN6	O43657	245 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	NUAK1	O60285	661 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	LZTS3	O60299	673 aa	Predicted RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	ATG13	O75143	517 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	C8G	P07360	202 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	AOC1	P19801	751 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	DRD1	P21728	446 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	AOAH	P28039	575 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	ADSL	P30566	484 aa	Predicted RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	CA5A	P35218	305 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	P2RY2	P41231	377 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	MAGEA9	P43362	315 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	KIR2DL1	P43626	348 aa	Predicted RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	KCNC1	P48547	511 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	GALK1	P51570	392 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	CCR3	P51677	355 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	INHBC	P55103	352 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	SMAD4	Q13485	552 aa	Known RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	STARD3	Q14849	445 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	CST6	Q15828	149 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	HSF5	Q4G112	596 aa	Predicted RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	NAIF1	Q69YI7	327 aa	Predicted RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	SBSN	Q6UWP8	590 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	SFTPA1	Q8IWL2	248 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	TCAIM	Q8N3R3	496 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	FBXL6	Q8N531	539 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	OR56A4	Q8NGH8	313 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	OR2T3	Q8NH03	318 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	ZNF483	Q8TF39	744 aa	Predicted RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	UBTD2	Q8WUN7	234 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	SCAMP4	Q969E2	229 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	NSL1	Q96IY1	281 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	MAEL	Q96JY0	434 aa	Known RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	GABRG3	Q99928	467 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	RPP25	Q9BUL9	199 aa	Known RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	WRAP53	Q9BUR4	548 aa	Known RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	NUSAP1	Q9BXS6	441 aa	Known RBP	11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	PFDN4	Q9NQP4	134 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	ITM2B	Q9Y287	266 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	FADS3	Q9Y5Q0	445 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	KMT2E	Q8IZD2	1858 aa		11.76	□□□□□ -0.53
LMNA-224	ENST00000515711	CAPN14	A8MX76	684 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	FFAR2	O15552	330 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	GRID2	O43424	1007 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	RECQL5	O94762	991 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	FGF4	P08620	206 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	GLUL	P15104	373 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	GM2A	P17900	193 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	VCL	P18206	1134 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	ITGB6	P18564	788 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	TARS	P26639	723 aa	Known RBP	11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	PRDX6	P30041	224 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	NTSR1	P30989	418 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	PIK3CG	P48736	1102 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	PRLHR	P49683	370 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	MNAT1	P51948	309 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	PKNOX1	P55347	436 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	IRX1	P78414	480 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	CDKL1	Q00532	357 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	CLC	Q05315	142 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	SFSWAP	Q12872	951 aa	Known RBP	11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	GTF2H3	Q13889	308 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	PPP1R3A	Q16821	1122 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	ACSBG2	Q5FVE4	666 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	PIP5KL1	Q5T9C9	394 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms