RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	RIOK1	Q9BRS2	568 aa	Known RBP	4.38	□□□□□ -1.71
RUFY3-215	ENST00000515479	GJD2	Q9UKL4	321 aa		4.38	□□□□□ -1.71
RUFY3-215	ENST00000515479	KCNS2	Q9ULS6	477 aa		4.38	□□□□□ -1.71
RUFY3-215	ENST00000515479	DNAJC16	Q9Y2G8	782 aa		4.38	□□□□□ -1.71
RUFY3-215	ENST00000515479	MROH7	Q68CQ1	1323 aa		4.38	□□□□□ -1.71
RUFY3-215	ENST00000515479	ZDBF2	Q9HCK1	2354 aa		4.38	□□□□□ -1.71
RUFY3-215	ENST00000515479	KIAA1217	Q5T5P2	1943 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	ARHGAP10	A1A4S6	786 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	GOLGA6L4	A6NEF3	574 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	CBY3	A6NI87	242 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	HSPB2	A8KAH6	182 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	C16orf97	H3BN30	126 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	MID1	O15344	667 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	ZBTB43	O43298	467 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	KIN	O60870	393 aa	Known RBP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	NDUFS7	O75251	213 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	SLC22A3	O75751	556 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	MTA2	O94776	668 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	CFC1B	P0CG36	223 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	CFC1	P0CG37	223 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	IFNAR1	P17181	557 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	GM2A	P17900	193 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	MCM3	P25205	808 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	U2AF2	P26368	475 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	METAP2	P50579	478 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	TRDN	Q13061	729 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	BRD3	Q15059	726 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	EFNB3	Q15768	340 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	HSPB2	Q16082	182 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	CAMK4	Q16566	473 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	SYT16	Q17RD7	645 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	SOWAHA	Q2M3V2	549 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	ANO1	Q5XXA6	986 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	FAM122C	Q6P4D5	195 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	TMED8	Q6PL24	325 aa	Predicted RBP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	SLC9B2	Q86UD5	537 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	DHX40	Q8IX18	779 aa	Known RBP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	CEP57L1	Q8IYX8	460 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	CPXM2	Q8N436	756 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	OR13A1	Q8NGR1	328 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	LNX1	Q8TBB1	728 aa	Predicted RBP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	TRAPPC12	Q8WVT3	735 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	RAB40A	Q8WXH6	277 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	FBXO17	Q96EF6	278 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	TIGD1	Q96MW7	591 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	ZNF830	Q96NB3	372 aa	Predicted RBP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	FAM167B	Q9BTA0	163 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	KRT23	Q9C075	422 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	NAPB	Q9H115	298 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	STN1	Q9H668	368 aa	Known RBP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	PTPRH	Q9HD43	1115 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	SCRT2	Q9NQ03	307 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	CISD1	Q9NZ45	108 aa	Known RBP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	MORF4L1	Q9UBU8	362 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	PYCARD	Q9ULZ3	195 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	GAB2	Q9UQC2	676 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	CLIC4	Q9Y696	253 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	A3GALT2	U3KPV4	340 aa		4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	ATXN2	Q99700	1313 aa	Known RBP	4.37	□□□□□ -1.71
RUFY3-215	ENST00000515479	UQCRHL	A0A096LP55	91 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479		A0A0U1RQF3	1178 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	C17orf113	A0A1B0GUU1	675 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	KLRF2	D3W0D1	207 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	SNAP23	O00161	211 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	PEX12	O00623	359 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	SOCS6	O14544	535 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	CPLX1	O14810	134 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	PRKAB2	O43741	272 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	ZG16	O60844	167 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	MMP1	P03956	469 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	UQCRH	P07919	91 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	PC	P11498	1178 aa	Known RBP	4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	PCNA	P12004	261 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	PFKFB1	P16118	471 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	CMA1	P23946	247 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	CCND3	P30281	292 aa	Predicted RBP	4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	HNRNPH1	P31943	449 aa	Known RBP	4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	STX2	P32856	288 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	CHKA	P35790	457 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	BLK	P51451	505 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	NDUFA8	P51970	172 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	FUT6	P51993	359 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	YWHAZ	P63104	245 aa	Known RBP	4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	TCP10	Q12799	353 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	POSTN	Q15063	836 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	STK38	Q15208	465 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	DPCR1	Q3MIW9	517 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	RESP18	Q5W5W9	173 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	WDR73	Q6P4I2	378 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	SLC26A9	Q7LBE3	791 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	TBC1D26	Q86UD7	250 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	SATL1	Q86VE3	508 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	KLHDC8B	Q8IXV7	354 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	MYRIP	Q8NFW9	859 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	SPATA22	Q8NHS9	363 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms