RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	CCL22	O00626	93 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	LDB2	O43679	373 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	BUD23	O43709	281 aa	Known RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	SIN3B	O75182	1162 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	CS	O75390	466 aa	Known RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	MT-CO1	P00395	513 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	PRL	P01236	227 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	PRKCG	P05129	697 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	PIRT	P0C851	137 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	DHRS4L1	P0CG22	281 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	TYK2	P29597	1187 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	SLC1A2	P43004	574 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	ETV4	P43268	484 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	MAGEA12	P43365	314 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	EIF1AX	P47813	144 aa	Known RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	ARSD	P51689	593 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	HNRNPH2	P55795	449 aa	Known RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	HNRNPK	P61978	463 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	MPP1	Q00013	466 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	SRSF1	Q07955	248 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	NSUN2	Q08J23	767 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	SF3A3	Q12874	501 aa	Known RBP eCLIP	6.62	□□□□□ -1.35	5e-7	■■■□□ 17.5
RACK1-231	ENST00000514183	TRAF2	Q12933	501 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	LAMB3	Q13751	1172 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	PDE1C	Q14123	709 aa	Predicted RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	LY6D	Q14210	128 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	GRM3	Q14832	879 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	SHB	Q15464	509 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	UGP2	Q16851	508 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	PITRM1	Q5JRX3	1037 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	GKAP1	Q5VSY0	366 aa	Predicted RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	ZNF470	Q6ECI4	717 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	RETSAT	Q6NUM9	610 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	NEPRO	Q6NW34	567 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	RGS9BP	Q6ZS82	235 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	NLRP9	Q7RTR0	991 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	KANSL1	Q7Z3B3	1105 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	CMC1	Q7Z7K0	106 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	SRL	Q86TD4	932 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	ZC3HC1	Q86WB0	502 aa	Known RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	TRIM69	Q86WT6	500 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	DENND6A	Q8IWF6	608 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	CACNA2D3	Q8IZS8	1091 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	OTUD6B	Q8N6M0	293 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	OR13J1	Q8NGT2	312 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	WDR36	Q8NI36	951 aa	Known RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	LRRC8C	Q8TDW0	803 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	CYB5D2	Q8WUJ1	264 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	ZNF75CP	Q92670	426 aa	Predicted RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	PTPRN2	Q92932	1015 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	ISL2	Q96A47	359 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	NAF1	Q96HR8	494 aa	Known RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	VPS39	Q96JC1	886 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	SEC16B	Q96JE7	1060 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	DNAJC1	Q96KC8	554 aa	Known RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	LMLN	Q96KR4	655 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	SLC46A1	Q96NT5	459 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	CCNL2	Q96S94	520 aa	Predicted RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	ELAC2	Q9BQ52	826 aa	Known RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	MCMBP	Q9BTE3	642 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	TDRD1	Q9BXT4	1180 aa	Known RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	VPS11	Q9H270	941 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	RHOJ	Q9H4E5	214 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	ZNF395	Q9H8N7	513 aa	Predicted RBP	6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	CAB39L	Q9H9S4	337 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	PREB	Q9HCU5	417 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	SNX15	Q9NRS6	342 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	6.62	□□□□□ -1.35	2e-25	■□□□□ 10
RACK1-231	ENST00000514183	ZNF232	Q9UNY5	417 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	PLLP	Q9Y342	182 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	KCTD3	Q9Y597	815 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	PCDHGC4	Q9Y5F7	938 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	SPO11	Q9Y5K1	396 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	ARL5A	Q9Y689	179 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	WASF2	Q9Y6W5	498 aa		6.62	□□□□□ -1.35
RACK1-231	ENST00000514183	DOPEY2	Q9Y3R5	2298 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	MID1	O15344	667 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	SMAD6	O43541	496 aa	Known RBP	6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	SIGLEC6	O43699	453 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	GLRA3	O75311	464 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	CRTAM	O95727	393 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	IL1B	P01584	269 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	SLC4A1	P02730	911 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	AHSG	P02765	367 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	MPO	P05164	745 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	PDHA1	P08559	390 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	NEFH	P12036	1026 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	BGN	P21810	368 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	GABRB3	P28472	473 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	HADHA	P40939	763 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	CTSO	P43234	321 aa	Predicted RBP	6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	CD151	P48509	253 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	PLK1	P53350	603 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	ADPRH	P54922	357 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	PSMA6	P60900	246 aa	Known RBP	6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	AP1S1	P61966	158 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	PRAME	P78395	509 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	TMPRSS15	P98073	1019 aa		6.61	□□□□□ -1.35
RACK1-231	ENST00000514183	ECT2L	Q008S8	904 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms