RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 CHRNA6Q15825 494 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 BBS9Q3SYG4 887 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 ZRANB3Q5FWF4 1079 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 LCN10Q6JVE6 187 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 PWWP2BQ6NUJ5 590 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 CHST15Q7LFX5 561 aaPredicted RBP12.06□□□□□ -0.48
SDHA-215ENST00000512962 GALNT13Q8IUC8 556 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 MCEMP1Q8IX19 187 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 PAF1Q8N7H5 531 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 THAP3Q8WTV1 239 aaPredicted RBP12.06□□□□□ -0.48
SDHA-215ENST00000512962 WFDC12Q8WWY7 111 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 PNPLA2Q96AD5 504 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 FAM81BQ96LP2 452 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 CINPQ9BW66 212 aaPredicted RBP12.06□□□□□ -0.48
SDHA-215ENST00000512962 ACSS2Q9NR19 701 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 TMEM51Q9NW97 253 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 NOCTQ9UK39 431 aaKnown RBP12.06□□□□□ -0.48
SDHA-215ENST00000512962 PADI1Q9ULC6 663 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 DCHS2Q6V1P9 2916 aa12.06□□□□□ -0.48
SDHA-215ENST00000512962 MDC1Q14676 2089 aaKnown RBP12.06□□□□□ -0.48
SDHA-215ENST00000512962 ANKUB1A6NFN9 424 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 LILRA5A6NI73 299 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 HNRNPRO43390 633 aaKnown RBP12.05□□□□□ -0.48
SDHA-215ENST00000512962 SNX2O60749 519 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 CLEC3AO75596 197 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 LSM8O95777 96 aaKnown RBP12.05□□□□□ -0.48
SDHA-215ENST00000512962 PTPN4P29074 926 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 DPTQ07507 201 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 CRB2Q5IJ48 1285 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 ZNF517Q6ZMY9 492 aaPredicted RBP12.05□□□□□ -0.48
SDHA-215ENST00000512962 CREBRFQ8IUR6 639 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 AP2M1Q96CW1 435 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 PLEKHG4BQ96PX9 1271 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 MCCC1Q96RQ3 725 aaPredicted RBP12.05□□□□□ -0.48
SDHA-215ENST00000512962 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.05□□□□□ -0.48
SDHA-215ENST00000512962 CPNE7Q9UBL6 633 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 CNOT8Q9UFF9 292 aaKnown RBP12.05□□□□□ -0.48
SDHA-215ENST00000512962 RWDD2AQ9UIY3 292 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 CNOT6Q9ULM6 557 aaKnown RBP12.05□□□□□ -0.48
SDHA-215ENST00000512962 ENTPD4Q9Y227 616 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 ZNF451Q9Y4E5 1061 aa12.05□□□□□ -0.48
SDHA-215ENST00000512962 POLEQ07864 2286 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 PIKFYVEQ9Y2I7 2098 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 GTPBP10A4D1E9 387 aaKnown RBP12.04□□□□□ -0.48
SDHA-215ENST00000512962 A6NL46 340 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 C21orf140B9A014 251 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 ZNF185O15231 689 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 DPM1O60762 260 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 PEX11BO96011 259 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 TP53P04637 393 aaPredicted RBP12.04□□□□□ -0.48
SDHA-215ENST00000512962 CYP1A1P04798 512 aaPredicted RBP12.04□□□□□ -0.48
SDHA-215ENST00000512962 PDHA1P08559 390 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 F3P13726 295 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 ITGA1P56199 1179 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 AP1S1P61966 158 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 UBE2HP62256 183 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 POLR2LP62875 67 aaKnown RBP12.04□□□□□ -0.48
SDHA-215ENST00000512962 FMO1Q01740 532 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 LRP8Q14114 963 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 IHHQ14623 411 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 IL11RAQ14626 422 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 LRRC66Q68CR7 880 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 SCYL2Q6P3W7 929 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 WDR59Q6PJI9 974 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 FAM92BQ6ZTR7 304 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 PLXDC1Q8IUK5 500 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 SLC34A3Q8N130 599 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 SLC38A9Q8NBW4 561 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 FBLIM1Q8WUP2 373 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 THAP4Q8WY91 577 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 MOCOSQ96EN8 888 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 WDR24Q96S15 920 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 PCDHB18PQ96TA0 734 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 NAA15Q9BXJ9 866 aaKnown RBP12.04□□□□□ -0.48
SDHA-215ENST00000512962 NOD2Q9HC29 1040 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 ZNF624Q9P2J8 865 aaPredicted RBP12.04□□□□□ -0.48
SDHA-215ENST00000512962 ZNHIT2Q9UHR6 403 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 FER1L5A0AVI2 2057 aa12.04□□□□□ -0.48
SDHA-215ENST00000512962 TCRBV5S1A1TA0A578 114 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 FADS2P1A8MWK0 482 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 F5H423 210 aaPredicted RBP12.03□□□□□ -0.48
SDHA-215ENST00000512962 MASP2O00187 686 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 PSMD11O00231 422 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 ZG16O60844 167 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 FOLR1P15328 257 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 GPD1P21695 349 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 NOP2P46087 812 aaKnown RBP12.03□□□□□ -0.48
SDHA-215ENST00000512962 TPI1P60174 286 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 MAXP61244 160 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 OGDHQ02218 1023 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 CDK18Q07002 472 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 NSUN2Q08J23 767 aaKnown RBP eCLIP12.03□□□□□ -0.48
SDHA-215ENST00000512962 GPS2Q13227 327 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 PEX6Q13608 980 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 KRTAP21-3Q3LHN1 58 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 ZNF648Q5T619 568 aaPredicted RBP12.03□□□□□ -0.48
SDHA-215ENST00000512962 PRSS42Q7Z5A4 293 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 SYVN1Q86TM6 617 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 SLC9B2Q86UD5 537 aa12.03□□□□□ -0.48
SDHA-215ENST00000512962 PPP1R3BQ86XI6 285 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms