RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 BTBD3Q9Y2F9 522 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CRYL1Q9Y2S2 319 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 DNMT3AQ9Y6K1 912 aaPredicted RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CSNK1G3Q9Y6M4 447 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CFAP47Q6ZTR5 3102 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PTPRBP23467 1997 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 LAMA5O15230 3695 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 LMO7DNF2Z398 122 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 TRIM38O00635 465 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 KHNYNO15037 678 aaKnown RBP4.85□□□□□ -1.63
LMNB1-208ENST00000504788 SCAMP1O15126 338 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 SDC3O75056 442 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 RFPL1O75677 317 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 POP7O75817 140 aaKnown RBP4.85□□□□□ -1.63
LMNB1-208ENST00000504788 DKK1O94907 266 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 RASGRP1O95267 797 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 ESR1P03372 595 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PKMP14618 531 aaKnown RBP4.85□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF7P17097 686 aaPredicted RBP4.85□□□□□ -1.63
LMNB1-208ENST00000504788 JUNDP17535 347 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PAMP19021 973 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PDHA2P29803 388 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 THOP1P52888 689 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 LIMK1P53667 647 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 TAS2R39P59534 338 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PPARDQ03181 441 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 LRP8Q14114 963 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PTK2BQ14289 1009 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 NFE2L1Q14494 772 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 NR1D2Q14995 579 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PRRT3Q5FWE3 981 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 AARS2Q5JTZ9 985 aaKnown RBP4.85□□□□□ -1.63
LMNB1-208ENST00000504788 LYPLAL1Q5VWZ2 237 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 DMRTA1Q5VZB9 504 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 MRNIPQ6NTE8 343 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 FBXO38Q6PIJ6 1188 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 DOK6Q6PKX4 331 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 TMEM220Q6QAJ8 160 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 WASH2PQ6VEQ5 465 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 NAPRTQ6XQN6 538 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF438Q7Z4V0 828 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PIP4P1Q86T03 277 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PIM3Q86V86 326 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 LRRTM4Q86VH4 590 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 TDRPQ86YL5 185 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PALM2Q8IXS6 379 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 CYP4X1Q8N118 509 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 KRT222Q8N1A0 295 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 MINDY1Q8N5J2 469 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 OR2W6PQ8NHA6 318 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 CALML6Q8TD86 181 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 HEXDCQ8WVB3 486 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PATE1Q8WXA2 126 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF514Q96K75 400 aaPredicted RBP4.85□□□□□ -1.63
LMNB1-208ENST00000504788 TTC25Q96NG3 672 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 GPR78Q96P69 363 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 OR2M4Q96R27 311 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PAFAH2Q99487 392 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 NRTNQ99748 197 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 CPNE1Q99829 537 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 FAM167BQ9BTA0 163 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 TMEM109Q9BVC6 243 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 GAREM1Q9H706 876 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 COG4Q9H9E3 785 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 CARS2Q9HA77 564 aaKnown RBP4.85□□□□□ -1.63
LMNB1-208ENST00000504788 WASH6PQ9NQA3 447 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 DNAJC28Q9NX36 388 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 TOR4AQ9NXH8 423 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 ZFATQ9P243 1243 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF624Q9P2J8 865 aaPredicted RBP4.85□□□□□ -1.63
LMNB1-208ENST00000504788 KLQ9UEF7 1012 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 APOBEC3BQ9UH17 382 aaKnown RBP4.85□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF180Q9UJW8 692 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 MTO1Q9Y2Z2 717 aaKnown RBP4.85□□□□□ -1.63
LMNB1-208ENST00000504788 PCM1Q15154 2024 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 CACNA1AO00555 2505 aa4.85□□□□□ -1.63
LMNB1-208ENST00000504788 UNC13CQ8NB66 2214 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 AKAP13Q12802 2813 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 HEATR5BQ9P2D3 2071 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 PRAMEF33A0A0G2JMD5 474 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 MGAT4DA6NG13 374 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 FOXO6A8MYZ6 492 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 H3BMM5 538 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 AGPSO00116 658 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 TPP1O14773 563 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 KMOO15229 486 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 AQP9O43315 295 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 MAGEC1O60732 1142 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 MATN4O95460 622 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 CFIP05156 583 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 TUBBP07437 444 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 ITGA2BP08514 1039 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 SBK3P0C264 359 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 SLC35E2BP0CK96 405 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 ACP5P13686 325 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF37AP17032 561 aaPredicted RBP4.84□□□□□ -1.63
LMNB1-208ENST00000504788 MSH3P20585 1137 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 KELP23276 732 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 HTR1BP28222 390 aa4.84□□□□□ -1.63
LMNB1-208ENST00000504788 FMO4P31512 558 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms