RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 CBR4Q8N4T8 237 aa6.3□□□□□ -1.4
COPB2-204ENST00000504295 SPATA22Q8NHS9 363 aa6.3□□□□□ -1.4
COPB2-204ENST00000504295 TWIST2Q8WVJ9 160 aa6.3□□□□□ -1.4
COPB2-204ENST00000504295 LINC01599Q8WXQ3 324 aa6.3□□□□□ -1.4
COPB2-204ENST00000504295 KIF12Q96FN5 646 aa6.3□□□□□ -1.4
COPB2-204ENST00000504295 SUSD3Q96L08 255 aa6.3□□□□□ -1.4
COPB2-204ENST00000504295 ZNF649Q9BS31 505 aa6.3□□□□□ -1.4
COPB2-204ENST00000504295 LIN28AQ9H9Z2 209 aaKnown RBP6.3□□□□□ -1.4
COPB2-204ENST00000504295 IFT80Q9P2H3 777 aaPredicted RBP6.3□□□□□ -1.4
COPB2-204ENST00000504295 NFKBIL1Q9UBC1 381 aaPredicted RBP6.3□□□□□ -1.4
COPB2-204ENST00000504295 GALPQ9UBC7 116 aa6.3□□□□□ -1.4
COPB2-204ENST00000504295 KLHL3Q9UH77 587 aa6.3□□□□□ -1.4
COPB2-204ENST00000504295 ITGB1BP2Q9UKP3 347 aa6.3□□□□□ -1.4
COPB2-204ENST00000504295 A0A0J9YYE9 177 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 TYW5A2RUC4 315 aaKnown RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 K7EPI3 171 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 PITPNM1O00562 1244 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 BCAS1O75363 584 aaPredicted RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 GPC4O75487 556 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 KCNK2O95069 426 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 SNAP29O95721 258 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 OLFM2O95897 454 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 STMN1P16949 149 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 CKMT2P17540 419 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 AFF1P51825 1210 aaKnown RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 CDH15P55291 814 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 OR4D2P58180 307 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 STX1BP61266 288 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 ZNF33BQ06732 778 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 IL10RBQ08334 325 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 RALGDSQ12967 914 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 LCP2Q13094 533 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 GPNMBQ14956 572 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 CCDC6Q16204 474 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 PHKG1Q16816 387 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 LRRC23Q53EV4 343 aaPredicted RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 ABRAXAS1Q6UWZ7 409 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 DDX53Q86TM3 631 aaKnown RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 MYO1HQ8N1T3 1032 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 WDR34Q96EX3 536 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 JAM3Q9BX67 310 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 LRRC3Q9BY71 257 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 ULBP1Q9BZM6 244 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 CXorf21Q9HAI6 301 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 NMUR1Q9HB89 426 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 ZNF711Q9Y462 761 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 ARHGEF37A1IGU5 675 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 MYBPHLA2RUH7 354 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 METTL15A6NJ78 407 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 CLDN5O00501 218 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 HGSO14964 777 aaPredicted RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 PHGDHO43175 533 aaKnown RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 ANXA9O76027 345 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 CNTN5O94779 1100 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 PGLSO95336 258 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 MAP3K6O95382 1288 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 MT-CYBP00156 380 aaPredicted RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 CLTBP09497 229 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 RHOQP17081 205 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 UGT1A6P19224 532 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 CD40LGP29965 261 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 RPS9P46781 194 aaKnown RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 LHX1P48742 406 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 VASPP50552 380 aaPredicted RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 GALK1P51570 392 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 SLC7A2P52569 658 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 HMGA2P52926 109 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 GEMP55040 296 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 BEX3Q00994 111 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 CD300CQ08708 224 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 DAG1Q14118 895 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 MS4A13Q5J8X5 152 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 UGT3A1Q6NUS8 523 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 HID1Q8IV36 788 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 SYNPOQ8N3V7 929 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 MDGA1Q8NFP4 955 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 OR52K2Q8NGK3 314 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 CASP10Q92851 521 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 VWCEQ96DN2 955 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 SMARCD1Q96GM5 515 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 ZNF764Q96H86 408 aaPredicted RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 CNBD2Q96M20 576 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 PPP1R16BQ96T49 567 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 CIB1Q99828 191 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 MTIF3Q9H2K0 278 aaKnown RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 SLC25A19Q9HC21 320 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 GKN1Q9NS71 199 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 SLCO3A1Q9UIG8 710 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 UTS2RQ9UKP6 389 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 INTS6Q9UL03 887 aaKnown RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 RUVBL2Q9Y230 463 aaKnown RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 ATP11BQ9Y2G3 1177 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 SNX10Q9Y5X0 201 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 C17orf102A2RUQ5 167 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 KRBA1A5PL33 1030 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 E9PAM4 449 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 H3BRB1 525 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 CACNB4O00305 520 aaPredicted RBP6.29□□□□□ -1.4
COPB2-204ENST00000504295 MRASO14807 208 aa6.29□□□□□ -1.4
COPB2-204ENST00000504295 PIP5K1BO14986 540 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms