RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 KIAA0408Q6ZU52 694 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF571Q7Z3V5 609 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 ADCK1Q86TW2 530 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 ZC3H7AQ8IWR0 971 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 WDTC1Q8N5D0 677 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 FBXO27Q8NI29 283 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 KCTD13Q8WZ19 329 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 KLHL6Q8WZ60 621 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SNAPC3Q92966 411 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PABPC5Q96DU9 382 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 CNDP2Q96KP4 475 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 RIPOR3Q96MK2 946 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 KCNK16Q96T55 309 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SEPT5Q99719 369 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 AGPAT1Q99943 283 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 STN1Q9H668 368 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SFXN1Q9H9B4 322 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 NPHS2Q9NP85 383 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 NENFQ9UMX5 172 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PACSIN2Q9UNF0 486 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PIAS3Q9Y6X2 628 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 OBSL1O75147 1896 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 C2orf16Q68DN1 1984 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 A0A087WXM4 84 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 FAM92AA1XBS5 289 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 FAM187AA6NFU0 413 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 PRRG1O14668 218 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 GNB5O14775 395 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 CAPNS1P04632 268 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 IL6P05231 212 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 PROS1P07225 676 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 MYL4P12829 197 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 UNGP13051 313 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 FOSL2P15408 326 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 CASP2P42575 452 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 GPR15P49685 360 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 RNF144AP50876 292 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 TPMTP51580 245 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC18A1P54219 525 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 NOMO3P69849 1222 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 CYP4F8P98187 520 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ARID5AQ03989 594 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 BNIP2Q12982 314 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ASTE1Q2TB18 679 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 TMEM95Q3KNT9 176 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ZFP69Q49AA0 526 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 AASDHQ4L235 1098 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 FAM76BQ5HYJ3 339 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 RBM20Q5T481 1227 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ATG16L1Q676U5 607 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC9A4Q6AI14 798 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ANKRD54Q6NXT1 300 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 USP51Q70EK9 711 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 BNIPLQ7Z465 357 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 PIGZQ86VD9 579 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 OR8H2Q8N162 312 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF540Q8NDQ6 660 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 MCUQ8NE86 351 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 OR4D10Q8NGI6 311 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC30A5Q8TAD4 765 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF707Q96C28 371 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 MCRS1Q96EZ8 462 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 PCDHB18PQ96TA0 734 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 TTLL2Q9BWV7 592 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 TRIM31Q9BZY9 425 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.5□□□□□ -0.893e-8■■■□□ 14.8
PDLIM5-207ENST00000503974 C1orf21Q9H246 121 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC6A15Q9H2J7 730 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 DDX28Q9NUL7 540 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 OLAHQ9NV23 265 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 CLEC1BQ9P126 229 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF624Q9P2J8 865 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 LGALS13Q9UHV8 139 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 CYTH4Q9UIA0 394 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF229Q9UJW7 825 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 COPS3Q9UNS2 423 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ANKRD6Q9Y2G4 727 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 MTO1Q9Y2Z2 717 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 AUP1Q9Y679 476 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 DENND4AQ7Z401 1863 aa9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF638Q14966 1978 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-207ENST00000503974 A0A0A6YYJ9 748 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 FOXO6A8MYZ6 492 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 SLCO1B7G3V0H7 640 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 H3BMM5 538 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 SYNCRIPO60506 623 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 SOAT2O75908 522 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 KCNK2O95069 426 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 HBQ1P09105 142 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 PRKAR1AP10644 381 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 HOXB8P17481 243 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 ITGB6P18564 788 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 RAB3AP20336 220 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 LTBRP36941 435 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 RECQLP46063 649 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 MAPK12P53778 367 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 EPHA5P54756 1037 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 CLCQ05315 142 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 TWF1Q12792 350 aa9.49□□□□□ -0.89
PDLIM5-207ENST00000503974 GRM7Q14831 915 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms