RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PYROXD1Q8WU10 500 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 LPGAT1Q92604 370 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 CERS2Q96G23 380 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 C9orf72Q96LT7 481 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 RABGEF1Q9UJ41 708 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 RNF215Q9Y6U7 377 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 CACNA1AO00555 2505 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 OR52A4PA6NMU1 304 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 OR56A5P0C7T3 313 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 FMO4P31512 558 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 CARSP49589 748 aaKnown RBP16.18■□□□□ 0.18
SCLT1-205ENST00000503401 DUSP3P51452 185 aaPredicted RBP16.18■□□□□ 0.18
SCLT1-205ENST00000503401 CLDN6P56747 220 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 CLCA4Q14CN2 919 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 BRD3Q15059 726 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 CTSL3PQ5NE16 218 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 N4BP2L1Q5TBK1 243 aaPredicted RBP16.18■□□□□ 0.18
SCLT1-205ENST00000503401 METRNLQ641Q3 311 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 IYDQ6PHW0 289 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 C17orf82Q86X59 251 aaPredicted RBP16.18■□□□□ 0.18
SCLT1-205ENST00000503401 ZNF761Q86XN6 746 aaPredicted RBP16.18■□□□□ 0.18
SCLT1-205ENST00000503401 SFRP1Q8N474 314 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 CCDC74AQ96AQ1 378 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 P2RY12Q9H244 342 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 NCKIPSDQ9NZQ3 722 aa16.18■□□□□ 0.18
SCLT1-205ENST00000503401 PRAMEF33A0A0G2JMD5 474 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 EIF3HO15372 352 aaKnown RBP eCLIP16.17■□□□□ 0.18
SCLT1-205ENST00000503401 RFPL3O75679 317 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 PIAS1O75925 651 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 TRIM16O95361 564 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 S1PR4O95977 384 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 ECHS1P30084 290 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 SSTR1P30872 391 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 PREPP48147 710 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 CSE1LP55060 971 aaKnown RBP16.17■□□□□ 0.18
SCLT1-205ENST00000503401 CBLBQ13191 982 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 ZNF658BQ4V348 819 aaPredicted RBP16.17■□□□□ 0.18
SCLT1-205ENST00000503401 TEX35Q5T0J7 233 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 PTRHD1Q6GMV3 140 aaKnown RBP16.17■□□□□ 0.18
SCLT1-205ENST00000503401 DHRS13Q6UX07 377 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 PALM2Q8IXS6 379 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 SPDYE1Q8NFV5 336 aaPredicted RBP16.17■□□□□ 0.18
SCLT1-205ENST00000503401 HM13Q8TCT9 377 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 MAPK15Q8TD08 544 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 ELMO1Q92556 727 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 FAM136AQ96C01 138 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 BIRC8Q96P09 236 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 TCF12Q99081 682 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 FAM167BQ9BTA0 163 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 COG4Q9H9E3 785 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 VPS37BQ9H9H4 285 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 LRIT1Q9P2V4 623 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 FBXO5Q9UKT4 447 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 CFAP20Q9Y6A4 193 aaKnown RBP16.17■□□□□ 0.18
SCLT1-205ENST00000503401 ASPMQ8IZT6 3477 aa16.17■□□□□ 0.18
SCLT1-205ENST00000503401 PTPRBP23467 1997 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 PPM1DO15297 605 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 KCNJ13O60928 360 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 FTH1P02794 183 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 GLB1P16278 677 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 PDHA2P29803 388 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 MAGEA4P43358 317 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 BIRC2Q13490 618 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 BOP1Q14137 746 aaKnown RBP16.16■□□□□ 0.18
SCLT1-205ENST00000503401 RNF187Q5TA31 235 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-205ENST00000503401 SPNS2Q8IVW8 549 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 Q8N9G6 341 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-205ENST00000503401 GSDMBQ8TAX9 411 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 CALML6Q8TD86 181 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 CCDC3Q9BQI4 270 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 WWP1Q9H0M0 922 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 EVA1BQ9NVM1 165 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 ZNF624Q9P2J8 865 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-205ENST00000503401 GNPTGQ9UJJ9 305 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 APOBEC2Q9Y235 224 aaKnown RBP16.16■□□□□ 0.18
SCLT1-205ENST00000503401 C17orf113A0A1B0GUU1 675 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 QSOX1O00391 747 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 PFDN6O15212 129 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 NIPSNAP2O75323 286 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 HAUS5O94927 633 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 RPS3P23396 243 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCLT1-205ENST00000503401 CCR7P32248 378 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 ABCG1P45844 678 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 TEDDM1Q5T9Z0 273 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 CNSTQ6PJW8 725 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 ABRAXAS1Q6UWZ7 409 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 C2CD4AQ8NCU7 369 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-205ENST00000503401 NAT6Q93015 286 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 SYNDIG1Q9H7V2 258 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 INTS10Q9NVR2 710 aaKnown RBP16.16■□□□□ 0.18
SCLT1-205ENST00000503401 CPNE7Q9UBL6 633 aa16.16■□□□□ 0.18
SCLT1-205ENST00000503401 RHPN2P1A8MT19 583 aa16.15■□□□□ 0.18
SCLT1-205ENST00000503401 NUDT21O43809 227 aaKnown RBP16.15■□□□□ 0.18
SCLT1-205ENST00000503401 DKK1O94907 266 aa16.15■□□□□ 0.18
SCLT1-205ENST00000503401 TOP3BO95985 862 aaKnown RBP16.15■□□□□ 0.18
SCLT1-205ENST00000503401 GABRB3P28472 473 aa16.15■□□□□ 0.18
SCLT1-205ENST00000503401 SLC19A1P41440 591 aa16.15■□□□□ 0.18
SCLT1-205ENST00000503401 GPX6P59796 221 aa16.15■□□□□ 0.18
SCLT1-205ENST00000503401 HHEXQ03014 270 aa16.15■□□□□ 0.18
SCLT1-205ENST00000503401 AGAP9Q5VTM2 703 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms