RNA–Protein interactions for RNA: ENST00000503079.6

SMN1-203, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5 BASIC

Gene SMN1, Length 1,219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-203ENST00000503079 GEMP55040 296 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 COPS2P61201 443 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 TMPRSS15P98073 1019 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 TAF1AQ15573 450 aaPredicted RBP17.13■□□□□ 0.33
SMN1-203ENST00000503079 KCTD19Q17RG1 926 aaPredicted RBP17.13■□□□□ 0.33
SMN1-203ENST00000503079 COLEC12Q5KU26 742 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 METRNLQ641Q3 311 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 CEACAM20Q6UY09 585 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 AMZ2Q86W34 360 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 PLXDC1Q8IUK5 500 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 TRIM48Q8IWZ4 208 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 GALNT6Q8NCL4 622 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 ZNF398Q8TD17 642 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 TEFMQ96QE5 360 aaKnown RBP17.13■□□□□ 0.33
SMN1-203ENST00000503079 OR6C1Q96RD1 312 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 SRPK1Q96SB4 655 aaKnown RBP17.13■□□□□ 0.33
SMN1-203ENST00000503079 WWP1Q9H0M0 922 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 FAM8A1Q9UBU6 413 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 EPHA6Q9UF33 1036 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 EFR3BQ9Y2G0 817 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 CAPN6Q9Y6Q1 641 aa17.13■□□□□ 0.33
SMN1-203ENST00000503079 MACROD2A1Z1Q3 448 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 GOLGA6L3A6NEY3 463 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 POLR1CO15160 346 aaPredicted RBP17.12■□□□□ 0.33
SMN1-203ENST00000503079 FTCDO95954 541 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 MTHFD1P11586 935 aaKnown RBP17.12■□□□□ 0.33
SMN1-203ENST00000503079 ARCN1P48444 511 aaKnown RBP17.12■□□□□ 0.33
SMN1-203ENST00000503079 POLE2P56282 527 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 FOXM1Q08050 763 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 CDC20Q12834 499 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 LAMB3Q13751 1172 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 SPA17Q15506 151 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 LDLRAP1Q5SW96 308 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 CCDC70Q6NSX1 233 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 CXorf40BQ96DE9 158 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 SLC41A2Q96JW4 573 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 DNAJC1Q96KC8 554 aaKnown RBP17.12■□□□□ 0.33
SMN1-203ENST00000503079 MAP3K3Q99759 626 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 FSD1LQ9BXM9 530 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 RAB33BQ9H082 229 aa17.12■□□□□ 0.33
SMN1-203ENST00000503079 GEMIN8Q9NWZ8 242 aaKnown RBP17.12■□□□□ 0.33
SMN1-203ENST00000503079 STX7O15400 261 aaKnown RBP17.11■□□□□ 0.33
SMN1-203ENST00000503079 SUV39H1O43463 412 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 KIAA0754O94854 1291 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 FGF5P12034 268 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 AMD1P17707 334 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 NELFEP18615 380 aaKnown RBP17.11■□□□□ 0.33
SMN1-203ENST00000503079 LPOP22079 712 aaPredicted RBP17.11■□□□□ 0.33
SMN1-203ENST00000503079 ABHD18Q0P651 414 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 BCL7AQ4VC05 210 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 CACHD1Q5VU97 1274 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 IRGCQ6NXR0 463 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 PRICKLE2Q7Z3G6 844 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 PRUNE1Q86TP1 453 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 TMTC1Q8IUR5 882 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 CDKL3Q8IVW4 592 aaPredicted RBP17.11■□□□□ 0.33
SMN1-203ENST00000503079 PIANPQ8IYJ0 282 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 SLC35B2Q8TB61 432 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 BRSK1Q8TDC3 778 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 STARD8Q92502 1023 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 ASB8Q9H765 288 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 GPN2Q9H9Y4 310 aaPredicted RBP17.11■□□□□ 0.33
SMN1-203ENST00000503079 ARNT2Q9HBZ2 717 aa17.11■□□□□ 0.33
SMN1-203ENST00000503079 IMP3Q9NV31 184 aaKnown RBP17.11■□□□□ 0.33
SMN1-203ENST00000503079 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMN1-203ENST00000503079 NBPF19A0A087WUL8 3843 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 IGLV3-16A0A075B6K0 115 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 TRBV5-4A0A0C4DH59 114 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 SPAG6O75602 509 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 ANXA9O76027 345 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 EBLN1P0CF75 366 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 TPH1P17752 444 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 NR1D1P20393 614 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 KPNA2P52292 529 aaKnown RBP17.1■□□□□ 0.33
SMN1-203ENST00000503079 RWDD2BP57060 319 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 ITGA9Q13797 1035 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 GTF2H3Q13889 308 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 PRAMEF17Q5VTA0 474 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 CAPRIN2Q6IMN6 1127 aaKnown RBP17.1■□□□□ 0.33
SMN1-203ENST00000503079 PWWP2BQ6NUJ5 590 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 DARS2Q6PI48 645 aaKnown RBP17.1■□□□□ 0.33
SMN1-203ENST00000503079 PTRH1Q86Y79 214 aaKnown RBP17.1■□□□□ 0.33
SMN1-203ENST00000503079 TAB3Q8N5C8 712 aaPredicted RBP17.1■□□□□ 0.33
SMN1-203ENST00000503079 OR2L2Q8NH16 312 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 LINC00615Q96LM1 132 aaPredicted RBP17.1■□□□□ 0.33
SMN1-203ENST00000503079 TBL1YQ9BQ87 522 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 ULBP3Q9BZM4 244 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 SLC24A2Q9UI40 661 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 CROTQ9UKG9 612 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 PKP3Q9Y446 797 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 PRSS21Q9Y6M0 314 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 RPS6KL1Q9Y6S9 549 aa17.1■□□□□ 0.33
SMN1-203ENST00000503079 SEC16AO15027 2179 aa17.09■□□□□ 0.33
SMN1-203ENST00000503079 OR5K3A6NET4 321 aa17.09■□□□□ 0.33
SMN1-203ENST00000503079 C5orf60A6NFR6 353 aa17.09■□□□□ 0.33
SMN1-203ENST00000503079 MGAT4DA6NG13 374 aa17.09■□□□□ 0.33
SMN1-203ENST00000503079 ZNF891A8MT65 544 aaPredicted RBP17.09■□□□□ 0.33
SMN1-203ENST00000503079 TOX3O15405 576 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms