RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 LDLRAP1Q5SW96 308 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 FNBP1LQ5T0N5 605 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 FBXO38Q6PIJ6 1188 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 CCDC50Q8IVM0 306 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 RBM12BQ8IXT5 1001 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 TC2NQ8N9U0 490 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 DTX3LQ8TDB6 740 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 BRSK1Q8TDC3 778 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 ZDHHC12Q96GR4 267 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 TTC25Q96NG3 672 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 INSM2Q96T92 566 aaPredicted RBP16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 FAM118BQ9BPY3 351 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 WWP1Q9H0M0 922 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 IMP3Q9NV31 184 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 SMOXQ9NWM0 555 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 HACD3Q9P035 362 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 FKBPLQ9UIM3 349 aa16.65■□□□□ 0.26
UBE2D3-213ENST00000502690 SNRNP200O75643 2136 aaKnown RBP16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 CDC14CA4D256 554 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 AKR1B15C9JRZ8 316 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 DDX3YO15523 660 aaKnown RBP16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 DNAJB5O75953 348 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 PRAMEF1O95521 474 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 PDGFAP04085 211 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 TPM1P09493 284 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 MAGEA1P43355 309 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 ARCN1P48444 511 aaKnown RBP16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 RPS18P62269 152 aaKnown RBP16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 SRSF1Q07955 248 aaKnown RBP eCLIP16.64■□□□□ 0.252e-8■□□□□ 10.6
UBE2D3-213ENST00000502690 MPP3Q13368 585 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 DNASE1L3Q13609 305 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 LACTB2Q53H82 288 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 METRNLQ641Q3 311 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 FAM199XQ6PEV8 388 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 BZW1Q7L1Q6 419 aaKnown RBP16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 DAAM2Q86T65 1068 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 PPP1R3BQ86XI6 285 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 RMDN2Q96LZ7 410 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 GBA3Q9H227 469 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 LHX9Q9NQ69 397 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 ANAPC2Q9UJX6 822 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 PLAAQ9Y263 795 aa16.64■□□□□ 0.25
UBE2D3-213ENST00000502690 CCDC88CQ9P219 2028 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 USP9XQ93008 2570 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 OR5K3A6NET4 321 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 CCL22O00626 93 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 MTSS1O43312 755 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 ZRANB2O95218 330 aaKnown RBP eCLIP16.63■□□□□ 0.251e-7■■□□□ 13.8
UBE2D3-213ENST00000502690 NTRK1P04629 796 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 AKT1P31749 480 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 ADRA1AP35348 466 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 MSLNQ13421 630 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 LAMB3Q13751 1172 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 ITGA9Q13797 1035 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 PLCL1Q15111 1095 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 BBS12Q6ZW61 710 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 CNGA4Q8IV77 575 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 SIDT2Q8NBJ9 832 aaKnown RBP16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 OR4K2Q8NGD2 314 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 ZNF398Q8TD17 642 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 VAT1Q99536 393 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 TRIM55Q9BYV6 548 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 ZCCHC2Q9C0B9 1178 aaKnown RBP16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 PKP3Q9Y446 797 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 PCDHGA6Q9Y5G7 932 aa16.63■□□□□ 0.25
UBE2D3-213ENST00000502690 RCCD1A6NED2 376 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 STX7O15400 261 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 CREG1O75629 220 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 PSMB4P28070 264 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 XIAPP98170 497 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 GPR19Q15760 415 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 DNTTIP2Q5QJE6 756 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 PRAMEF17Q5VTA0 474 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 ZDHHC20Q5W0Z9 365 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 CPZQ66K79 652 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 C11orf63Q6NUN7 778 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 AADACL2Q6P093 401 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 RANBP10Q6VN20 620 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 RCOR2Q8IZ40 523 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 SLC38A9Q8NBW4 561 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 OR13C4Q8NGS5 318 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 ACTL9Q8TC94 416 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 UBXN4Q92575 508 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 C12orf66Q96MD2 445 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 FSD1LQ9BXM9 530 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 TWSG1Q9GZX9 223 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 ACTL8Q9H568 366 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 SLC24A2Q9UI40 661 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 RARRES3Q9UL19 164 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 PADI1Q9ULC6 663 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 POLHQ9Y253 713 aa16.62■□□□□ 0.25
UBE2D3-213ENST00000502690 SHANK1Q9Y566 2161 aa16.61■□□□□ 0.25
UBE2D3-213ENST00000502690 PIPSLA2A3N6 862 aa16.61■□□□□ 0.25
UBE2D3-213ENST00000502690 MGAT4DA6NG13 374 aa16.61■□□□□ 0.25
UBE2D3-213ENST00000502690 TLCD2A6NGC4 264 aa16.61■□□□□ 0.25
UBE2D3-213ENST00000502690 HACD1B0YJ81 288 aa16.61■□□□□ 0.25
UBE2D3-213ENST00000502690 H7C0C1 242 aa16.61■□□□□ 0.25
UBE2D3-213ENST00000502690 KCNJ13O60928 360 aa16.61■□□□□ 0.25
UBE2D3-213ENST00000502690 SRP72O76094 671 aaKnown RBP16.61■□□□□ 0.25
UBE2D3-213ENST00000502690 LCA5LO95447 670 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms