RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 RNF31Q96EP0 1072 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 HHIPL1Q96JK4 782 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 AGAP4Q96P64 663 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 HTATIP2Q9BUP3 242 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 SLC23A1Q9UHI7 598 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 NUFIP1Q9UHK0 495 aaKnown RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 GMEB2Q9UKD1 530 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 AURKCQ9UQB9 309 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 PCDHGA9Q9Y5G4 932 aaKnown RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 TRAV6A0A075B6T7 132 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 KRT87PA6NCN2 255 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 CASTOR2A6NHX0 329 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 RRN3P2A6NIE6 340 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 TFECO14948 347 aaPredicted RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 MED7O43513 233 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 MRPS14O60783 128 aaKnown RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 UPK1BO75841 260 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 POMCP01189 267 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 LTFP02788 710 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 ASGR2P07307 311 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 INHBAP08476 426 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 HSPA13P48723 471 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 CPT1AP50416 773 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 TMBIM6P55061 237 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 RAC1P63000 192 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 CAP1Q01518 475 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 PTPN11Q06124 597 aaPredicted RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 CDC20Q12834 499 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 TFDP2Q14188 446 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 MFSD13AQ14CX5 517 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 HIST2H2ACQ16777 129 aaPredicted RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 GOLGA7BQ2TAP0 167 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 CTU2Q2VPK5 515 aaKnown RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 N4BP2L1Q5TBK1 243 aaPredicted RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 STRADAQ7RTN6 431 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 GLCCI1Q86VQ1 547 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 SYTL1Q8IYJ3 562 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 NETO2Q8NC67 525 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 KCTD6Q8NC69 237 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 MAGEE2Q8TD90 523 aaPredicted RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 USP7Q93009 1102 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 TMEM80Q96HE8 168 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 TINAGL1Q9GZM7 467 aaPredicted RBP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 SDCBP2Q9H190 292 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 MMP28Q9H239 520 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 ASNSD1Q9NWL6 643 aa5.72□□□□□ -1.49
SOX2-OT-218ENST00000498731 ATP8B3O60423 1300 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 TOR1AO14656 332 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 GREM1O60565 184 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 NOS1APO75052 506 aaPredicted RBP5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 KRT7P08729 469 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 PDGFRAP16234 1089 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 CYP2A7P20853 494 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 NR2C2P49116 596 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 LIMK1P53667 647 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 CRADDP78560 199 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 MEP1AQ16819 746 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 BCL7AQ4VC05 210 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 LAIR1Q6GTX8 287 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 LIN54Q6MZP7 749 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 CFAP77Q6ZQR2 320 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 NECAB2Q7Z6G3 386 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 SCUBE3Q8IX30 993 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 RHOT1Q8IXI2 618 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 FAM9CQ8IZT9 166 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 UBE2J2Q8N2K1 259 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 CBARPQ8N350 705 aaPredicted RBP5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 SMG8Q8ND04 991 aaKnown RBP5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 OR52H1Q8NGJ2 320 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 JOSD2Q8TAC2 188 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 LRRC20Q8TCA0 184 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 FNIP1Q8TF40 1166 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 NDRG1Q92597 394 aaKnown RBP5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 PLD4Q96BZ4 506 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 TMEM176AQ96HP8 235 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 DEFB118Q96PH6 123 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 GAD1Q99259 594 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 SDHCQ99643 169 aaPredicted RBP5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 MRPL45Q9BRJ2 306 aaKnown RBP5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 NT5C1AQ9BXI3 368 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 BCL2L14Q9BZR8 327 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 SLIRPQ9GZT3 109 aaKnown RBP5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 IPO11Q9UI26 975 aaKnown RBP5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 CNOT11Q9UKZ1 510 aaKnown RBP5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 PCDHB3Q9Y5E6 796 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 PCDHGB6Q9Y5F9 930 aa5.71□□□□□ -1.49
SOX2-OT-218ENST00000498731 FAM189A1O60320 539 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 HUS1O60921 280 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 FBXO24O75426 580 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 MICAL2O94851 1124 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ALDOAP04075 364 aaKnown RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 CALB1P05937 261 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 POU2F1P14859 743 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ACO1P21399 889 aaKnown RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 GLDCP23378 1020 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 CNTFP26441 200 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 MTHFRP42898 656 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms