RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	IMP3	Q9NV31	184 aa	Known RBP	7.66	□□□□□ -1.18
NVL-223	ENST00000496393	FANCL	Q9NW38	375 aa		7.66	□□□□□ -1.18
NVL-223	ENST00000496393	FAM8A1	Q9UBU6	413 aa		7.66	□□□□□ -1.18
NVL-223	ENST00000496393	EPHA6	Q9UF33	1036 aa		7.66	□□□□□ -1.18
NVL-223	ENST00000496393	TCFL5	Q9UL49	500 aa		7.66	□□□□□ -1.18
NVL-223	ENST00000496393	PCDHGB7	Q9Y5F8	929 aa		7.66	□□□□□ -1.18
NVL-223	ENST00000496393	SPTB	P11277	2137 aa		7.66	□□□□□ -1.18
NVL-223	ENST00000496393	RGSL1	A5PLK6	1076 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	OR5K3	A6NET4	321 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	TLCD2	A6NGC4	264 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	LRRC53	A6NM62	1247 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	ANKRD66	B4E2M5	251 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	KCNK1	O00180	336 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	MEN1	O00255	615 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	GPR39	O43194	453 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	HNRNPR	O43390	633 aa	Known RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	KLK3	P07288	261 aa	Predicted RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	MMP2	P08253	660 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	ATP1A3	P13637	1013 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	BPI	P17213	487 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	VARS	P26640	1264 aa	Known RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	CA5A	P35218	305 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	PCK1	P35558	622 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	ANP32A	P39687	249 aa	Known RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	GLRB	P48167	497 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	FOXL2	P58012	376 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	RPL26	P61254	145 aa	Known RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	TUBB4B	P68371	445 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	HSD11B2	P80365	405 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	SLC25A11	Q02978	314 aa	Known RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	GBE1	Q04446	702 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	TUBB2A	Q13885	445 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	GTF2H3	Q13889	308 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	ASIC2	Q16515	512 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	RPE65	Q16518	533 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	PCSK7	Q16549	785 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	BOLA3	Q53S33	107 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	PLEKHS1	Q5SXH7	462 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	CCDC122	Q5T0U0	273 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	VWA5B1	Q5TIE3	1220 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	AGAP9	Q5VTM2	703 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	IZUMO3	Q5VZ72	239 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	E4F1	Q66K89	784 aa	Predicted RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	TIGD7	Q6NT04	549 aa	Predicted RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	ZNF571	Q7Z3V5	609 aa	Predicted RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	IRF2BP2	Q7Z5L9	587 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	C11orf96	Q7Z7L8	435 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	CPNE8	Q86YQ8	564 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	RBM12B	Q8IXT5	1001 aa	Known RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	SYTL1	Q8IYJ3	562 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	DSEL	Q8IZU8	1212 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	D2HGDH	Q8N465	521 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	TRAM1L1	Q8N609	369 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	ZNF511	Q8NB15	262 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	ENOX1	Q8TC92	643 aa	Known RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	NAT14	Q8WUY8	206 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	ZNF501	Q96CX3	271 aa	Predicted RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	MOCOS	Q96EN8	888 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	SGSM3	Q96HU1	749 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	FCRL4	Q96PJ5	515 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	SMAD5	Q99717	465 aa	Known RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	ZSCAN5A	Q9BUG6	496 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	TUBB2B	Q9BVA1	445 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	GPR63	Q9BZJ6	419 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	HAUS4	Q9H6D7	363 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	KCND1	Q9NSA2	647 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	HRASLS2	Q9NWW9	162 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	SEMA5B	Q9P283	1151 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	TMPRSS11E	Q9UL52	423 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	RPL26L1	Q9UNX3	145 aa	Known RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	B3GNT3	Q9Y2A9	372 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	PIKFYVE	Q9Y2I7	2098 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	ZNF711	Q9Y462	761 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	COPG1	Q9Y678	874 aa	Known RBP	7.65	□□□□□ -1.18
NVL-223	ENST00000496393	SCIN	Q9Y6U3	715 aa		7.65	□□□□□ -1.18
NVL-223	ENST00000496393	APC	P25054	2843 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	OR6C74	A6NCV1	312 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	GPR89A	B7ZAQ6	455 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	TMEM150C	B9EJG8	249 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	PRSS44	E7EML9	344 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	DDX3X	O00571	662 aa	Known RBP eCLIP	7.64	□□□□□ -1.19
NVL-223	ENST00000496393	AURKA	O14965	403 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	MATN3	O15232	486 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	LRRTM2	O43300	516 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	VEGFD	O43915	354 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	ZG16	O60844	167 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	ZBTB11	O95625	1053 aa	Predicted RBP	7.64	□□□□□ -1.19
NVL-223	ENST00000496393	CAPN1	P07384	714 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	CCDC172	P0C7W6	258 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	GPR89B	P0CG08	455 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	VCL	P18206	1134 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	RORA	P35398	523 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	KPNA2	P52292	529 aa	Known RBP	7.64	□□□□□ -1.19
NVL-223	ENST00000496393	CTSC	P53634	463 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	RRAD	P55042	308 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	WDR4	P57081	412 aa	Known RBP	7.64	□□□□□ -1.19
NVL-223	ENST00000496393	GSDMD	P57764	484 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	DCDC1	P59894	354 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	ZBTB17	Q13105	803 aa		7.64	□□□□□ -1.19
NVL-223	ENST00000496393	XRCC4	Q13426	336 aa		7.64	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms