RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 MC2RQ01718 297 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 RHDQ02161 417 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 FOXM1Q08050 763 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 DMPKQ09013 629 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 SIX1Q15475 284 aaPredicted RBP10.39□□□□□ -0.75
NELFE-213ENST00000494956 OASLQ15646 514 aaKnown RBP10.39□□□□□ -0.75
NELFE-213ENST00000494956 LINC00303Q3SY05 128 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 MEI1Q5TIA1 1274 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 METRNLQ641Q3 311 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 IRGCQ6NXR0 463 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 FBXO38Q6PIJ6 1188 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 CERS6Q6ZMG9 384 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 TAS2R42Q7RTR8 314 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 SLC13A5Q86YT5 568 aaPredicted RBP10.39□□□□□ -0.75
NELFE-213ENST00000494956 PIANPQ8IYJ0 282 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 NXPE1Q8N323 547 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 RNF10Q8N5U6 811 aaKnown RBP10.39□□□□□ -0.75
NELFE-213ENST00000494956 EXTL1Q92935 676 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 C9orf72Q96LT7 481 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 RMDN2Q96LZ7 410 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 C12orf66Q96MD2 445 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 PPM1MQ96MI6 270 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 ZCCHC2Q9C0B9 1178 aaKnown RBP10.39□□□□□ -0.75
NELFE-213ENST00000494956 LRRC40Q9H9A6 602 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 UCK1Q9HA47 277 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 ETNK1Q9HBU6 452 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 SIDT1Q9NXL6 827 aaKnown RBP10.39□□□□□ -0.75
NELFE-213ENST00000494956 PCDHGA4Q9Y5G9 962 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 PCDHGA3Q9Y5H0 932 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 PRSS21Q9Y6M0 314 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 ATRXP46100 2492 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 ATMQ13315 3056 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 LOC101059948A0A1B0GTJ6 334 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 AGAP14A8MT82 685 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 KRT86O43790 486 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 RAD1O60671 282 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 RASSF9O75901 435 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 AP2A1O95782 977 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 MTHFD1P11586 935 aaKnown RBP10.38□□□□□ -0.75
NELFE-213ENST00000494956 LIFP15018 202 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 ITGALP20701 1170 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 HALP42357 657 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 CAPZBP47756 277 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 GSDMDP57764 484 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 CCZ1BP86790 482 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 CCZ1P86791 482 aaPredicted RBP10.38□□□□□ -0.75
NELFE-213ENST00000494956 KCNAB1Q14722 419 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 LONRF2Q1L5Z9 754 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 BCL7AQ4VC05 210 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 DCAF12Q5T6F0 453 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 CACHD1Q5VU97 1274 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 NAPRTQ6XQN6 538 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 SNX20Q7Z614 316 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 SERPINA9Q86WD7 417 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 PLXDC1Q8IUK5 500 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 CFAP206Q8IYR0 622 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 CACNA2D3Q8IZS8 1091 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 TXLNBQ8N3L3 684 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 ZNF843Q8N446 348 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 CLDN19Q8N6F1 224 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 IL22RA1Q8N6P7 574 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 EXD3Q8N9H8 876 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 OR2L2Q8NH16 312 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 DCUN1D1Q96GG9 259 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 CDKN2AIPNLQ96HQ2 116 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 ZNF778Q96MU6 729 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 DDA1Q9BW61 102 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 TSGA10Q9BZW7 698 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 SPRY4Q9C004 299 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 NLE1Q9NVX2 485 aaPredicted RBP10.38□□□□□ -0.75
NELFE-213ENST00000494956 SLC2A6Q9UGQ3 507 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 PCDHB11Q9Y5F2 797 aa10.38□□□□□ -0.75
NELFE-213ENST00000494956 DNMT3AQ9Y6K1 912 aaPredicted RBP10.38□□□□□ -0.75
NELFE-213ENST00000494956 IGHV5-51A0A0C4DH38 117 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 TRBV5-4A0A0C4DH59 114 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 GOLGA6L6A8MZA4 724 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.37□□□□□ -0.75
NELFE-213ENST00000494956 PYCARD-AS1I3L0S3 204 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 ARHGAP6O43182 974 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 STK17BO94768 372 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 TIAF1O95411 115 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 ATP1B2P14415 290 aaPredicted RBP10.37□□□□□ -0.75
NELFE-213ENST00000494956 ACRV1P26436 265 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 CD82P27701 267 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 PDHA2P29803 388 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 CXCR5P32302 372 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 HADHAP40939 763 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 KCNJ1P48048 391 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 PREPP48147 710 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 PRLHRP49683 370 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 TERF1P54274 439 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 BRD3Q15059 726 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 PLCL1Q15111 1095 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 RPS6KA1Q15418 735 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 DBN1Q16643 649 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 P3H1Q32P28 736 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 LRRC8AQ8IWT6 810 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 AVL9Q8NBF6 648 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 PHC3Q8NDX5 983 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 CCDC112Q8NEF3 446 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms