RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SDCCAG3Q96C92 435 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 SP110Q9HB58 689 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 GALPQ9UBC7 116 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 KLHL3Q9UH77 587 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 PCDHGA10Q9Y5H3 936 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 WASH4PA8MWX3 477 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 PTGES3LE9PB15 166 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 SNX2O60749 519 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 HK3P52790 923 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 CHRNB3Q05901 458 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 ACOX1Q15067 660 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 TYSND1Q2T9J0 566 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 ANKS6Q68DC2 871 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 FATE1Q969F0 183 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 KLHL25Q9H0H3 589 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 MROH8Q9H579 483 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 COMMD8Q9NX08 183 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 VAPAQ9P0L0 249 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 NADKO95544 446 aaPredicted RBP15.16■□□□□ 0.02
SDF4-207ENST00000494748 CCDC159P0C7I6 412 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 PRKACGP22612 351 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 CD40LGP29965 261 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 MAP2K4P45985 399 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 TEX26Q8N6G2 289 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 ITCHQ96J02 903 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 TRIT1Q9H3H1 467 aaKnown RBP15.16■□□□□ 0.02
SDF4-207ENST00000494748 VTA1Q9NP79 307 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 TMLHEQ9NVH6 421 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 ERVK-18Q9QC07 812 aa15.16■□□□□ 0.02
SDF4-207ENST00000494748 CHD5Q8TDI0 1954 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 MBLAC1A4D2B0 266 aaPredicted RBP15.15■□□□□ 0.02
SDF4-207ENST00000494748 CST1P01037 141 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 SMPD1P17405 629 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 TGFBR1P36897 503 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 DGKQP52824 942 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 EPS8Q12929 822 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 ZNF772Q68DY9 489 aaPredicted RBP15.15■□□□□ 0.02
SDF4-207ENST00000494748 SVOPLQ8N434 492 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 ATP6V0D2Q8N8Y2 350 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 ZNF555Q8NEP9 628 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 OR13C4Q8NGS5 318 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 HMCESQ96FZ2 354 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 OTUD5Q96G74 571 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 RBM4BQ9BQ04 359 aaKnown RBP15.15■□□□□ 0.02
SDF4-207ENST00000494748 RBM4Q9BWF3 364 aaKnown RBP15.15■□□□□ 0.02
SDF4-207ENST00000494748 TPK1Q9H3S4 243 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 TMEM98Q9Y2Y6 226 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 PLXNA3P51805 1871 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 E2F3O00716 465 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 STX16O14662 325 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 DFNA5O60443 496 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 SNAI1O95863 264 aaPredicted RBP15.15■□□□□ 0.02
SDF4-207ENST00000494748 PTPN2P17706 415 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 PFKLP17858 780 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 DCTP40126 519 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 EIF2DP41214 584 aaKnown RBP15.15■□□□□ 0.02
SDF4-207ENST00000494748 LHX1P48742 406 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 STC1P52823 247 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 PRKG2Q13237 762 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 PWP1Q13610 501 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 GBX1Q14549 363 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 B3GNT8Q7Z7M8 397 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 MSRB3Q8IXL7 192 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 OR8J3Q8NGG0 315 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 FBXO30Q8TB52 745 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 STAG3L4Q8TBR4 150 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 REXO5Q96IC2 774 aaKnown RBP15.15■□□□□ 0.02
SDF4-207ENST00000494748 PKMYT1Q99640 499 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 RHNO1Q9BSD3 238 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 AGO3Q9H9G7 860 aaKnown RBP15.15■□□□□ 0.02
SDF4-207ENST00000494748 UXTQ9UBK9 157 aaPredicted RBP15.15■□□□□ 0.02
SDF4-207ENST00000494748 CDH9Q9ULB4 789 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 RNF112Q9ULX5 631 aa15.15■□□□□ 0.02
SDF4-207ENST00000494748 GLP2RO95838 553 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 TSPAN12O95859 305 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 NFKBIAP25963 317 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 TPTEP56180 551 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 NCS1P62166 190 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 LSM3P62310 102 aaKnown RBP15.14■□□□□ 0.01
SDF4-207ENST00000494748 RAPSNQ13702 412 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 PIK3R6Q5UE93 754 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 CCDC80Q76M96 950 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 DCP2Q8IU60 420 aaKnown RBP15.14■□□□□ 0.01
SDF4-207ENST00000494748 DUSP21Q9H596 190 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 ELP3Q9H9T3 547 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 HECAQ9UBI9 543 aaPredicted RBP15.14■□□□□ 0.01
SDF4-207ENST00000494748 AASSQ9UDR5 926 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 LCHNA4D1U4 455 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 PRMT5O14744 637 aaPredicted RBP15.14■□□□□ 0.01
SDF4-207ENST00000494748 G6PDP11413 515 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 JUNDP17535 347 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 BMPR1AP36894 532 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 SLC35A2P78381 396 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 ILF2Q12905 390 aaKnown RBP15.14■□□□□ 0.01
SDF4-207ENST00000494748 SYT6Q5T7P8 510 aaPredicted RBP15.14■□□□□ 0.01
SDF4-207ENST00000494748 PRSS48Q7RTY5 328 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 CYP2U1Q7Z449 544 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 TMEM86AQ8N2M4 240 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 DCBLD1Q8N8Z6 715 aa15.14■□□□□ 0.01
SDF4-207ENST00000494748 FNDC5Q8NAU1 212 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms