RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DHRS7Q9Y394 339 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 PRORSD1PA6NEY8 169 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 FBP2O00757 339 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 VILLO15195 856 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 DENRO43583 198 aaKnown RBP13.59□□□□□ -0.23
VCP-207ENST00000493886 SRCP12931 536 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 ZNF7P17097 686 aaPredicted RBP13.59□□□□□ -0.23
VCP-207ENST00000493886 SERPINA4P29622 427 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 CA5AP35218 305 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 NEK2P51955 445 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 ERVFC1P60507 584 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 NAA20P61599 178 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 MYLK3Q32MK0 819 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 ZFP1Q6P2D0 407 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 SNX20Q7Z614 316 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 ZSWIM9Q86XI8 627 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 DDIASQ8IXT1 998 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 ABTB1Q969K4 478 aaPredicted RBP13.59□□□□□ -0.23
VCP-207ENST00000493886 PPWD1Q96BP3 646 aaKnown RBP13.59□□□□□ -0.23
VCP-207ENST00000493886 CIB1Q99828 191 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 EMILIN2Q9BXX0 1053 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 CLPBQ9H078 707 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 TUBB1Q9H4B7 451 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 IL26Q9NPH9 171 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 CACNA2D2Q9NY47 1150 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 CD274Q9NZQ7 290 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 C7orf72A4D263 438 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 GOLGA8CPA6NN73 597 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 TRIM38O00635 465 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 SNX2O60749 519 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 SNRPB2P08579 225 aaKnown RBP13.58□□□□□ -0.24
VCP-207ENST00000493886 ITGALP20701 1170 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 HLA-FP30511 346 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 RPL5P46777 297 aaKnown RBP13.58□□□□□ -0.24
VCP-207ENST00000493886 STX1BP61266 288 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 NFATC2Q13469 925 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 PTRHD1Q6GMV3 140 aaKnown RBP13.58□□□□□ -0.24
VCP-207ENST00000493886 TMEM102Q8N9M5 508 aaPredicted RBP13.58□□□□□ -0.24
VCP-207ENST00000493886 C19orf43Q9BQ61 176 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 COQ10BQ9H8M1 238 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 PCTPQ9UKL6 214 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 TMCO1Q9UM00 188 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 TMA7Q9Y2S6 64 aaKnown RBP13.58□□□□□ -0.24
VCP-207ENST00000493886 MYOFQ9NZM1 2061 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 ZNF839A8K0R7 811 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 HIDE1A8MVS5 230 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 HNRNPRO43390 633 aaKnown RBP13.58□□□□□ -0.24
VCP-207ENST00000493886 TPST1O60507 370 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 CRCPO75575 148 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 FAM58BPP0C7Q3 252 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 BPIP17213 487 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.242e-7■■■■■ 31.6
VCP-207ENST00000493886 SNRPD1P62314 119 aaKnown RBP13.58□□□□□ -0.24
VCP-207ENST00000493886 PHEXP78562 749 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 NECAB2Q7Z6G3 386 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 TICAM1Q8IUC6 712 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 ZFP28Q8NHY6 868 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 TCEAL4Q96EI5 215 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 SLC25A23Q9BV35 468 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 BOCQ9BWV1 1114 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 EPS15L1Q9UBC2 864 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 RAB26Q9ULW5 256 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 BTRCQ9Y297 605 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 INSL6Q9Y581 213 aa13.58□□□□□ -0.24
VCP-207ENST00000493886 LAMA2P24043 3122 aaKnown RBP13.58□□□□□ -0.24
VCP-207ENST00000493886 SMIM31A0A1B0GVY4 71 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 A8MX80 341 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 TNFAIP8O95379 198 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 CKMT2P17540 419 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 ACADVLP49748 655 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 TGFBIQ15582 683 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 PLPP4Q5VZY2 271 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 PHYKPLQ8IUZ5 450 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 RBFAQ8N0V3 343 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 ADCY4Q8NFM4 1077 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 RIN3Q8TB24 985 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 ESAMQ96AP7 390 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 ARMC5Q96C12 935 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 PDLIM5Q96HC4 596 aaKnown RBP13.57□□□□□ -0.24
VCP-207ENST00000493886 LRCH3Q96II8 777 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 HIC2Q96JB3 615 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 CIPCQ9C0C6 399 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 AP4S1Q9Y587 144 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 IRAK3Q9Y616 596 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 SCN8AQ9UQD0 1980 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 GLYATL1P3A0A0U1RQE8 302 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 A0A1W2PQ67 120 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 MRASO14807 208 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 BNIP3LO60238 219 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 TIPRLO75663 272 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 MLYCDO95822 493 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 LINC00032P0C843 101 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 PIM1P11309 404 aaPredicted RBP13.57□□□□□ -0.24
VCP-207ENST00000493886 UGT1A6P19224 532 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 UGT1A1P22309 533 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 UGT1A4P22310 534 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 PRDX3P30048 256 aaKnown RBP13.57□□□□□ -0.24
VCP-207ENST00000493886 UGT1A3P35503 534 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 UGT1A5P35504 534 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 SLC7A2P52569 658 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms