RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 DDX43Q9NXZ2 648 aaKnown RBP3.25□□□□□ -1.89
VPS36-205ENST00000492650 HOOK1Q9UJC3 728 aaKnown RBP3.25□□□□□ -1.89
VPS36-205ENST00000492650 LIPT1Q9Y234 373 aa3.25□□□□□ -1.89
VPS36-205ENST00000492650 TCF19Q9Y242 345 aa3.25□□□□□ -1.89
VPS36-205ENST00000492650 POMT1Q9Y6A1 747 aa3.25□□□□□ -1.89
VPS36-205ENST00000492650 TRAV34A0A0B4J273 112 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 FAM237BA0A1B0GVD1 139 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 A0A1W2PQM1 296 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 A4D1N5 150 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 HSPB2A8KAH6 182 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 TMEM110-MUSTN1A8MSY1 372 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 A8MZ25 164 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 SCAMP1O15126 338 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 PGRMC2O15173 223 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 PSMD10O75832 226 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 HEXBP07686 556 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 COX7A2P14406 83 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 SLC2A4P14672 509 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 GPTP24298 496 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 HNRNPH1P31943 449 aaKnown RBP3.24□□□□□ -1.89
VPS36-205ENST00000492650 CDKN1AP38936 164 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 NRIP1P48552 1158 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 AMPHP49418 695 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 VEGFCP49767 419 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 LIG4P49917 911 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 BLKP51451 505 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 MRPL12P52815 198 aaKnown RBP3.24□□□□□ -1.89
VPS36-205ENST00000492650 ERVK11-1P61568 191 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 UFM1P61960 85 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 HTD2P86397 168 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 RPA4Q13156 261 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 HSPB2Q16082 182 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 CRY2Q49AN0 593 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 TOR1AIP1Q5JTV8 583 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 GLRA4Q5JXX5 417 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 C19orf48Q6RUI8 117 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 SUSD1Q6UWL2 747 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 ZER1Q7Z7L7 766 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 ADGRG6Q86SQ4 1221 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 CIARTQ8N365 385 aaPredicted RBP3.24□□□□□ -1.89
VPS36-205ENST00000492650 TNIP2Q8NFZ5 429 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 CTCFLQ8NI51 663 aaPredicted RBP3.24□□□□□ -1.89
VPS36-205ENST00000492650 SETD6Q8TBK2 473 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 DUSP19Q8WTR2 217 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 RAB40AQ8WXH6 277 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 MR1Q95460 341 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 PDLIM5Q96HC4 596 aaKnown RBP3.24□□□□□ -1.89
VPS36-205ENST00000492650 CCDC114Q96M63 670 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 SLX1AQ9BQ83 275 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 NAA11Q9BSU3 229 aaPredicted RBP3.24□□□□□ -1.89
VPS36-205ENST00000492650 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.24□□□□□ -1.89
VPS36-205ENST00000492650 TEX13BQ9BXU2 312 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 TRIM6Q9C030 488 aaPredicted RBP3.24□□□□□ -1.89
VPS36-205ENST00000492650 ST6GALNAC4Q9H4F1 302 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 MROH8Q9H579 483 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 SH2D4AQ9H788 454 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 ALKBH4Q9NXW9 302 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 MPP6Q9NZW5 540 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 CTNNA3Q9UI47 895 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 TUBE1Q9UJT0 475 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 FBXL5Q9UKA1 691 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 A3GALT2U3KPV4 340 aa3.24□□□□□ -1.89
VPS36-205ENST00000492650 LRRD1A4D1F6 860 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 RGSL1A5PLK6 1076 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 TEX22C9J3V5 150 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 K7EPI3 171 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 DNM1LO00429 736 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 CTDSP2O14595 271 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 ZNF263O14978 683 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 PER2O15055 1255 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 PLRG1O43660 514 aaKnown RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 RFPL2O75678 378 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 RECQL5O94762 991 aaPredicted RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 GCNT3O95395 438 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 C22orf31O95567 290 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 AMBPP02760 352 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 URODP06132 367 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 TPOP07202 933 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 ABCB1P08183 1280 aaPredicted RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 CCDC159P0C7I6 412 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 SFTPCP11686 197 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 CDH1P12830 882 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 FDPSP14324 419 aaKnown RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 SP100P23497 879 aaPredicted RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 MARK3P27448 753 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 CASQ1P31415 396 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 PBX3P40426 434 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 MTHFRP42898 656 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 PIP4K2AP48426 406 aaPredicted RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 FMO5P49326 533 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 TAF6P49848 677 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 SLC26A5P58743 744 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 OLR1P78380 273 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 SCN1BQ07699 218 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 SLC20A2Q08357 652 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 GOLGA8DPQ0D2H9 430 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 SNTB1Q13884 538 aaKnown RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 BAATQ14032 418 aaPredicted RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 MEP1BQ16820 701 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms