RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TMEM139Q8IV31 216 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 RASGRP3Q8IV61 690 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 ZSCAN1Q8NBB4 408 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 PHC3Q8NDX5 983 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 DDHD1Q8NEL9 900 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 ZNF398Q8TD17 642 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 CT55Q8WUE5 264 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 ATG4AQ8WYN0 398 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 DNAJC1Q96KC8 554 aaKnown RBP8.71□□□□□ -1.02
HDAC3-211ENST00000491581 FSD1LQ9BXM9 530 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 TRIM55Q9BYV6 548 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 ASPSCR1Q9BZE9 553 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 OSBPL8Q9BZF1 889 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 EPN3Q9H201 632 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 ZNF768Q9H5H4 540 aaKnown RBP8.71□□□□□ -1.02
HDAC3-211ENST00000491581 STN1Q9H668 368 aaKnown RBP8.71□□□□□ -1.02
HDAC3-211ENST00000491581 XKR8Q9H6D3 395 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 ASB8Q9H765 288 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 HAUS2Q9NVX0 235 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 CIDEBQ9UHD4 219 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 LNPEPQ9UIQ6 1025 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 PCDHA3Q9Y5H8 950 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 EPN1Q9Y6I3 576 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-211ENST00000491581 PRSS21Q9Y6M0 314 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 RPS6KL1Q9Y6S9 549 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 AHCTF1Q8WYP5 2266 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 CCDC88CQ9P219 2028 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 OR6C74A6NCV1 312 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 OR5K4A6NMS3 321 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 APOC4-APOC2K7ER74 178 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 MASP2O00187 686 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 STX7O15400 261 aaKnown RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 LDB2O43679 373 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 SPAG6O75602 509 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 SRP72O76094 671 aaKnown RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 WISP1O95388 367 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 APOC2P02655 101 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 MTHFD1P11586 935 aaKnown RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 ETS1P14921 441 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 POLR2CP19387 275 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 FECHP22830 423 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 GRIA1P42261 906 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 KPNA2P52292 529 aaKnown RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 NAP1L1P55209 391 aaKnown RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 RAB15P59190 212 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 MPP3Q13368 585 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 GTF2H3Q13889 308 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 BRD3Q15059 726 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 PLCL1Q15111 1095 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 SLC14A2Q15849 920 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 CCDC38Q502W7 563 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 CCDC181Q5TID7 509 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 AGAP9Q5VTM2 703 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 CPZQ66K79 652 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 PDPK2PQ6A1A2 396 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 DARS2Q6PI48 645 aaKnown RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 CEACAM20Q6UY09 585 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 PLXDC1Q8IUK5 500 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 FAM20CQ8IXL6 584 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 RAVER1Q8IY67 606 aaKnown RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 PIANPQ8IYJ0 282 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 CFAP206Q8IYR0 622 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 CLDN19Q8N6F1 224 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 LRRC57Q8N9N7 239 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 SPC24Q8NBT2 197 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 CCDC112Q8NEF3 446 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 KLHL6Q8WZ60 621 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 SH3KBP1Q96B97 665 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 ABHD17AQ96GS6 310 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 SLC45A3Q96JT2 553 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 C12orf66Q96MD2 445 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 TTC25Q96NG3 672 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 TLR10Q9BXR5 811 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 SLC25A18Q9H1K4 315 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 POT1Q9NUX5 634 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 GEMIN8Q9NWZ8 242 aaKnown RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 LCMT1Q9UIC8 334 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 TP53TG5Q9Y2B4 290 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 HEMK1Q9Y5R4 338 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-211ENST00000491581 CAPN6Q9Y6Q1 641 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 COL6A6A6NMZ7 2263 aa8.7□□□□□ -1.02
HDAC3-211ENST00000491581 SNRNP200O75643 2136 aaKnown RBP8.69□□□□□ -1.02
HDAC3-211ENST00000491581 CDC14CA4D256 554 aa8.69□□□□□ -1.02
HDAC3-211ENST00000491581 KRT87PA6NCN2 255 aa8.69□□□□□ -1.02
HDAC3-211ENST00000491581 ZNF891A8MT65 544 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-211ENST00000491581 BTN3A3O00478 584 aa8.69□□□□□ -1.02
HDAC3-211ENST00000491581 ZW10O43264 779 aa8.69□□□□□ -1.02
HDAC3-211ENST00000491581 F7P08709 466 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-211ENST00000491581 ANKRD34CP0C6C1 535 aa8.69□□□□□ -1.02
HDAC3-211ENST00000491581 SLC2A4P14672 509 aa8.69□□□□□ -1.02
HDAC3-211ENST00000491581 NELFEP18615 380 aaKnown RBP8.69□□□□□ -1.02
HDAC3-211ENST00000491581 HLA-DPA1P20036 260 aa8.69□□□□□ -1.02
HDAC3-211ENST00000491581 TCN2P20062 427 aa8.69□□□□□ -1.02
HDAC3-211ENST00000491581 MSH3P20585 1137 aa8.69□□□□□ -1.02
HDAC3-211ENST00000491581 LPOP22079 712 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-211ENST00000491581 MAP4P27816 1152 aaKnown RBP8.69□□□□□ -1.02
HDAC3-211ENST00000491581 MC4RP32245 332 aa8.69□□□□□ -1.02
HDAC3-211ENST00000491581 ZNF140P52738 457 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-211ENST00000491581 ABRQ12979 859 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms