RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 EIF2AK4Q9P2K8 1649 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 RNF103-CHMP3A0A140T963 221 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 FAM237AA0A1B0GTK4 181 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TCRBV21S2A2A0A5A6 115 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 LNP1A1A4G5 178 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TARSL2A2RTX5 802 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 FOXO6A8MYZ6 492 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 RNF103O00237 685 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 SOCS6O14544 535 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 HS6ST1O60243 411 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 IPO7O95373 1038 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ADAP00813 363 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TGFAP01135 160 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ALPLP05186 524 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 SRPRAP08240 638 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 CYC1P08574 325 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TPBGLP0DKB5 382 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TNNT1P13805 278 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 IGFBP2P18065 325 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 LBPP18428 481 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ITGAXP20702 1163 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 AHCYP23526 432 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 GJC1P36383 396 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 MATR3P43243 847 aaKnown RBP eCLIP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 DHPSP49366 369 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 JAK3P52333 1124 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 UCP2P55851 309 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 CLDN2P57739 230 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TLE3Q04726 772 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 CXCL9Q07325 125 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ELP6Q0PNE2 266 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 MTX1Q13505 466 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 DNASE1L3Q13609 305 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 CEBPEQ15744 281 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ZSCAN23Q3MJ62 389 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ATP13A5Q4VNC0 1218 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 EARS2Q5JPH6 523 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 CES4AQ5XG92 561 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 LRRC8EQ6NSJ5 796 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 MFSD7Q6UXD7 560 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 KYAT3Q6YP21 454 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 C15orf39Q6ZRI6 1047 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TAOK1Q7L7X3 1001 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TFAP2DQ7Z6R9 452 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TADA2BQ86TJ2 420 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 GPAT4Q86UL3 456 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 NOXA1Q86UR1 476 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 SERPINA12Q8IW75 414 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 WDR63Q8IWG1 891 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ELMOD2Q8IZ81 293 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 SCYL3Q8IZE3 742 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ARFGAP1Q8N6T3 406 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 RRNAD1Q96FB5 475 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ZFYVE19Q96K21 471 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 CFAP53Q96M91 514 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 RUFY1Q96T51 708 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 WDR83Q9BRX9 315 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ZPBPQ9BS86 351 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 UTP14AQ9BVJ6 771 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 NPLQ9BXD5 320 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 CCSER1Q9C0I3 900 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 PPIL3Q9H2H8 161 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 FZD8Q9H461 694 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 CDCP1Q9H5V8 836 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 DENND2DQ9H6A0 471 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 SYTL2Q9HCH5 934 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 PFDN4Q9NQP4 134 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TCP11L1Q9NUJ3 509 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ARL8BQ9NVJ2 186 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 KIAA1456Q9P272 454 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 SEMA5BQ9P283 1151 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 FBXW11Q9UKB1 542 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 A4GNTQ9UNA3 340 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 NUDCQ9Y266 331 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 B3GNT3Q9Y2A9 372 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 SYNMO15061 1565 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 SPATA31D1Q6ZQQ2 1576 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 UGGT1Q9NYU2 1555 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 ERVK-7P63135 1459 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 MROH2AA6NES4 1674 aa3.17□□□□□ -1.9
DEPDC1-204ENST00000489862 TNRQ92752 1358 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 FAM205AQ6ZU69 1335 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 UNC13BO14795 1591 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 A0A0B4J293 547 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 EDDM13A0A1B0GTR0 161 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 C1orf226A1L170 272 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 HTR3EA5X5Y0 456 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 FAM90A10PA6NDY2 464 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 ANXA2P2A6NMY6 339 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 PES1O00541 588 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 INPPL1O15357 1258 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 AKR7A3O95154 331 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 ADCY5O95622 1261 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 PLAUP00749 431 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 CRYABP02511 175 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 HEXAP06865 529 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 HSPA5P11021 654 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 ETS1P14921 441 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 CASQ1P31415 396 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 IGHMBP2P38935 993 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms