RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PXNP49023 591 aaPredicted RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 CCR3P51677 355 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 GSTM4Q03013 218 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 GABPB1Q06547 395 aaPredicted RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 TSNQ15631 228 aaKnown RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 PPP1R14CQ8TAE6 165 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 STAG3L4Q8TBR4 150 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 SREK1Q8WXA9 508 aaKnown RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 ATOH8Q96SQ7 321 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 OXSMQ9NWU1 459 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 DLGAP2Q9P1A6 1054 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 RNF112Q9ULX5 631 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 NUMA1Q14980 2115 aa20.52■□□□□ 0.88
SND1-214ENST00000489417 GPR89AB7ZAQ6 455 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 CACNB4O00305 520 aaPredicted RBP20.52■□□□□ 0.87
SND1-214ENST00000489417 KLF11O14901 512 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 CHUKO15111 745 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 NUAK1O60285 661 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 PDGFBP01127 241 aaPredicted RBP20.52■□□□□ 0.87
SND1-214ENST00000489417 GPR89BP0CG08 455 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 PBLDP30039 288 aaPredicted RBP20.52■□□□□ 0.87
SND1-214ENST00000489417 PRKAA2P54646 552 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 HSPA14Q0VDF9 509 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 SYTL3Q4VX76 610 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 ATG16L1Q676U5 607 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 CRTC3Q6UUV7 619 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 CYHR1Q6ZMK1 362 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 LRRC34Q8IZ02 419 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 FRMD1Q8N878 549 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 ASZ1Q8WWH4 475 aa20.52■□□□□ 0.87
SND1-214ENST00000489417 LINC00615Q96LM1 132 aaPredicted RBP20.52■□□□□ 0.87
SND1-214ENST00000489417 FAM126AQ9BYI3 521 aaPredicted RBP20.52■□□□□ 0.87
SND1-214ENST00000489417 TMEM202A6NGA9 273 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 K7ESF4 209 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 TRIM13O60858 407 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 SMIM24O75264 130 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 GPC4O75487 556 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 HOXC4P09017 264 aaPredicted RBP20.51■□□□□ 0.87
SND1-214ENST00000489417 MPC1LP0DKB6 136 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 NUDT1P36639 197 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 CLDN2P57739 230 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 TJAP1Q5JTD0 557 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 LIPMQ5VYY2 423 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 MAMSTRQ6ZN01 415 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 ADAMTSL2Q86TH1 951 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 ZNF547Q8IVP9 402 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 FAM160A2Q8N612 972 aaPredicted RBP20.51■□□□□ 0.87
SND1-214ENST00000489417 GLMNQ92990 594 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 EXT2Q93063 718 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 FAM8A1Q9UBU6 413 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 DMTF1Q9Y222 760 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 CDYLQ9Y232 598 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 CA5BQ9Y2D0 317 aa20.51■□□□□ 0.87
SND1-214ENST00000489417 SLC5A10A0PJK1 596 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 POM121BA6NF01 834 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 NEMP2A6NFY4 417 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 SYCE1LA8MT33 242 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 A8MT66 165 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 DCXO43602 365 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 PI15O43692 258 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 NDUFS2O75306 463 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 H2AFYO75367 372 aaKnown RBP20.5■□□□□ 0.87
SND1-214ENST00000489417 POP7O75817 140 aaKnown RBP20.5■□□□□ 0.87
SND1-214ENST00000489417 SERPINE1P05121 402 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 TPBGLP0DKB5 382 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 KIAA1024LP59773 190 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 ASPHQ12797 758 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 STX3Q13277 289 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 ZNF658BQ4V348 819 aaPredicted RBP20.5■□□□□ 0.87
SND1-214ENST00000489417 GCNT7Q6ZNI0 430 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 ZCCHC23Q6ZST2 131 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 LRRTM4Q86VH4 590 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 BIRC7Q96CA5 298 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 CCDC126Q96EE4 140 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 EBF2Q9HAK2 575 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 HS3ST3A1Q9Y663 406 aa20.5■□□□□ 0.87
SND1-214ENST00000489417 C17orf113A0A1B0GUU1 675 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 SUPT3HB4E1H0 165 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 PRAMEF26H0Y7S4 382 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 UBXN8O00124 270 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 LIN7AO14910 233 aaPredicted RBP20.49■□□□□ 0.87
SND1-214ENST00000489417 AXIN1O15169 862 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 GRID2O43424 1007 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 SUPT3HO75486 399 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 SLCO2B1O94956 709 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 DRD4P21917 467 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 PFN3P60673 137 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 BST1Q10588 318 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 TERF2Q15554 542 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 NEK10Q6ZWH5 1172 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 GPSM1Q86YR5 675 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 VRK3Q8IV63 474 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 SLC22A9Q8IVM8 553 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 OR6Y1Q8NGX8 325 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 TMEM159Q96B96 161 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 BMFQ96LC9 184 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 RABEP2Q9H5N1 569 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 RMI1Q9H9A7 625 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 SLC17A4Q9Y2C5 497 aa20.49■□□□□ 0.87
SND1-214ENST00000489417 PCYT1BQ9Y5K3 369 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms