RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CXCL14O95715 111 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 CHRNA4P43681 627 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 CHIT1Q13231 466 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 SLC51AQ86UW1 340 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 FIBCD1Q8N539 461 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TSPAN18Q96SJ8 248 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 DSN1Q9H410 356 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 DCCP43146 1447 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 LSM1O15116 133 aaKnown RBP17.41■□□□□ 0.38
NPHP4-209ENST00000489180 CADM2Q8N3J6 435 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 B3GALT6Q96L58 329 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 WRAP53Q9BUR4 548 aaKnown RBP17.41■□□□□ 0.38
NPHP4-209ENST00000489180 A0A1W2PQ67 120 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 SCELO95171 688 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 GRIA1P42261 906 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 ASMTP46597 345 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TRPV1Q8NER1 839 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 PJA1Q8NG27 643 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 GULP1Q9UBP9 304 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TBC1D3DA0A087WVF3 549 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TBC1D3IA0A087WXS9 549 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TBC1D3EA0A087X179 549 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TBC1D3KA0A087X1G2 549 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 FAM172BPA6NC97 362 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TBC1D3FA6NER0 549 aaPredicted RBP17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TBC1D3LB9A6J9 549 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 NPHS1O60500 1241 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TULP3O75386 442 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 C22orf31O95567 290 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TBC1D3HP0C7X1 549 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 FMO3P31513 532 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 RPS6KA3P51812 740 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 GNA12Q03113 381 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 CYP1B1Q16678 543 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 FAM174BQ3ZCQ3 159 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 FAM46CQ5VWP2 391 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TBC1D3GQ6DHY5 549 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TBC1D3CQ6IPX1 549 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 TBC1D3Q8IZP1 549 aaPredicted RBP17.41■□□□□ 0.38
NPHP4-209ENST00000489180 SPPL2BQ8TCT7 592 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 SKA1Q96BD8 255 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 PTPN18Q99952 460 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 ST6GALNAC4Q9H4F1 302 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 HMGXB4Q9UGU5 601 aa17.41■□□□□ 0.38
NPHP4-209ENST00000489180 MYBPHLA2RUH7 354 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 NEMP2A6NFY4 417 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 PAX3P23760 479 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 HSF2Q03933 536 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 TCEAL5Q5H9L2 206 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 SNAP47Q5SQN1 464 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 TAF8Q7Z7C8 310 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 JAZF1Q86VZ6 243 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 FAM129CQ86XR2 697 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 ZDHHC21Q8IVQ6 265 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 CFAP206Q8IYR0 622 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 TRPV3Q8NET8 790 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 CDK15Q96Q40 435 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 EBF2Q9HAK2 575 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 CCL16O15467 120 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 INSIG1O15503 277 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 PCCBP05166 539 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 L1CAMP32004 1257 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 WASP42768 502 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 ADAM17P78536 824 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 CREMQ03060 361 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 CYP2S1Q96SQ9 504 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 SNX7Q9UNH6 387 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 TM4SF1P30408 202 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 HADHBP55084 474 aaKnown RBP17.4■□□□□ 0.38
NPHP4-209ENST00000489180 SEMG2Q02383 582 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 PLPP4Q5VZY2 271 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 LEMD2Q8NC56 503 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 IRGQQ8WZA9 623 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 TIFAQ96CG3 184 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 SNX27Q96L92 541 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 DMRTB1Q96MA1 342 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 NKX1-2Q9UD57 310 aaPredicted RBP17.4■□□□□ 0.38
NPHP4-209ENST00000489180 MAGEB17A8MXT2 336 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 CACNB4O00305 520 aaPredicted RBP17.4■□□□□ 0.38
NPHP4-209ENST00000489180 FUT4P22083 530 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 SUZ12Q15022 739 aaKnown RBP17.4■□□□□ 0.38
NPHP4-209ENST00000489180 TYSND1Q2T9J0 566 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 PDPRQ8NCN5 879 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 C11orf65Q8NCR3 313 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 HNRNPABQ99729 332 aaKnown RBP17.4■□□□□ 0.38
NPHP4-209ENST00000489180 BHLHE41Q9C0J9 482 aaPredicted RBP17.4■□□□□ 0.38
NPHP4-209ENST00000489180 WRAP73Q9P2S5 460 aaPredicted RBP17.4■□□□□ 0.38
NPHP4-209ENST00000489180 A0A1W2PRG6 482 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 OR51F1A6NGY5 319 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 CXorf49A8MYA2 514 aaPredicted RBP17.4■□□□□ 0.38
NPHP4-209ENST00000489180 TEX28O15482 410 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 TSPAN9O75954 239 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 CCNB2O95067 398 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 CFHP08603 1231 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 EZH1Q92800 747 aaPredicted RBP17.4■□□□□ 0.38
NPHP4-209ENST00000489180 DMAC2Q9NW81 257 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 MALT1Q9UDY8 824 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 PADI3Q9ULW8 664 aa17.4■□□□□ 0.38
NPHP4-209ENST00000489180 TTC24A2A3L6 582 aaPredicted RBP17.39■□□□□ 0.37
NPHP4-209ENST00000489180 SCAMP1O15126 338 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms