RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TCEAL1Q15170 157 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 LLGL1Q15334 1064 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 PWWP2BQ6NUJ5 590 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 TCTN3Q6NUS6 607 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 ZC3H18Q86VM9 953 aaKnown RBP18.02■□□□□ 0.48
HDAC6-231ENST00000488905 VSTM4Q8IW00 320 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 P3H4Q92791 437 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 QKIQ96PU8 341 aaKnown RBP eCLIP18.02■□□□□ 0.48
HDAC6-231ENST00000488905 FCRL5Q96RD9 977 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 VAT1Q99536 393 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 ACTL8Q9H568 366 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 IMP3Q9NV31 184 aaKnown RBP18.02■□□□□ 0.48
HDAC6-231ENST00000488905 INTUQ9ULD6 942 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 MAN2B2Q9Y2E5 1009 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 PKP3Q9Y446 797 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 CLEC18AA5D8T8 446 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 K7EM74 188 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 BUD23O43709 281 aaKnown RBP18.01■□□□□ 0.47
HDAC6-231ENST00000488905 EBLN1P0CF75 366 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 MTHFD1P11586 935 aaKnown RBP18.01■□□□□ 0.47
HDAC6-231ENST00000488905 AKT1P31749 480 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 ACY1Q03154 408 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 TFDP3Q5H9I0 405 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 DNTTIP2Q5QJE6 756 aaKnown RBP18.01■□□□□ 0.47
HDAC6-231ENST00000488905 TMEM220Q6QAJ8 160 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 CLEC18BQ6UXF7 455 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 KMT5CQ86Y97 462 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 CLEC18CQ8NCF0 446 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 HAUS1Q96CS2 278 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 ZNF514Q96K75 400 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-231ENST00000488905 FCRL4Q96PJ5 515 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 CD180Q99467 661 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 MAP3K3Q99759 626 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 FSD1LQ9BXM9 530 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 PLAAQ9Y263 795 aa18.01■□□□□ 0.47
HDAC6-231ENST00000488905 DNMT3AQ9Y6K1 912 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-231ENST00000488905 SEC16AO15027 2179 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 hCG_1818297A0A087WSY0 165 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 PIPSLA2A3N6 862 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 OR5K3A6NET4 321 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 PRAMEF1O95521 474 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 RECKO95980 971 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 XRCC4Q13426 336 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 LONRF2Q1L5Z9 754 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 FNBP1LQ5T0N5 605 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 DUS1LQ6P1R4 473 aaKnown RBP18■□□□□ 0.47
HDAC6-231ENST00000488905 CERS6Q6ZMG9 384 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 PID1Q7Z2X4 250 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 BEND7Q8N7W2 519 aaPredicted RBP18■□□□□ 0.47
HDAC6-231ENST00000488905 MIB2Q96AX9 1013 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 GOLPH3Q9H4A6 298 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 FGF21Q9NSA1 209 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 RSPH14Q9UHP6 348 aa18■□□□□ 0.47
HDAC6-231ENST00000488905 CFAP20Q9Y6A4 193 aaKnown RBP18■□□□□ 0.47
HDAC6-231ENST00000488905 MSH3P20585 1137 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 ARL4DP49703 201 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 HSD11B2P80365 405 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 METRNLQ641Q3 311 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 ASB18Q6ZVZ8 466 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 DET1Q7L5Y6 550 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 BPHLQ86WA6 291 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-231ENST00000488905 OOSP2Q86WS3 158 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 APLFQ8IW19 511 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-231ENST00000488905 KATNAL2Q8IYT4 538 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 TEX19Q8NA77 164 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 SEC14L1Q92503 715 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 C12orf66Q96MD2 445 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 RUFY1Q96T51 708 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 WWP1Q9H0M0 922 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 TLK1Q9UKI8 766 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 TRHDEQ9UKU6 1024 aa17.99■□□□□ 0.47
HDAC6-231ENST00000488905 UBA6A0AVT1 1052 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-231ENST00000488905 HACD1B0YJ81 288 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 STX7O15400 261 aaKnown RBP17.98■□□□□ 0.47
HDAC6-231ENST00000488905 CPNE3O75131 537 aaKnown RBP17.98■□□□□ 0.47
HDAC6-231ENST00000488905 DNAJB5O75953 348 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 NTRK1P04629 796 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 CD97P48960 835 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 MARCKSL1P49006 195 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 HADHBP55084 474 aaKnown RBP17.98■□□□□ 0.47
HDAC6-231ENST00000488905 TUBB4BP68371 445 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 TUBB2AQ13885 445 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 PTPRCAPQ14761 206 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 CNGA4Q8IV77 575 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 CCDC50Q8IVM0 306 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 D2HGDHQ8N465 521 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 INSM2Q96T92 566 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-231ENST00000488905 GORASP1Q9BQQ3 440 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 TUBB2BQ9BVA1 445 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 GBA3Q9H227 469 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 KIR3DX1Q9H7L2 352 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 HRASLS2Q9NWW9 162 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 ALG6Q9Y672 507 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 ARL5AQ9Y689 179 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 SHANK1Q9Y566 2161 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 ICE1Q9Y2F5 2266 aa17.98■□□□□ 0.47
HDAC6-231ENST00000488905 FER1L5A0AVI2 2057 aa17.97■□□□□ 0.47
HDAC6-231ENST00000488905 KLHL33A6NCF5 533 aa17.97■□□□□ 0.47
HDAC6-231ENST00000488905 MGAT4DA6NG13 374 aa17.97■□□□□ 0.47
HDAC6-231ENST00000488905 SLC35G4P0C7Q5 338 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms