RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 ELP5Q8TE02 316 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 CYB5D2Q8WUJ1 264 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 SCFD1Q8WVM8 642 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 ASZ1Q8WWH4 475 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 LIPHQ8WWY8 451 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 SEPT8Q92599 483 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 DLG3Q92796 817 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 RHBDF1Q96CC6 855 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 RNF31Q96EP0 1072 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 INTS4Q96HW7 963 aaKnown RBP5.47□□□□□ -1.53
SF1-217ENST00000486960 FCRL3Q96P31 734 aaPredicted RBP5.47□□□□□ -1.53
SF1-217ENST00000486960 KCNS3Q9BQ31 491 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 FDXACB1Q9BRP7 624 aaPredicted RBP5.47□□□□□ -1.53
SF1-217ENST00000486960 SF3B5Q9BWJ5 86 aaKnown RBP5.47□□□□□ -1.53
SF1-217ENST00000486960 GRIP2Q9C0E4 1043 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 KLC2Q9H0B6 622 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 CRISPLD1Q9H336 500 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 EVA1AQ9H8M9 152 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 AKIRIN1Q9H9L7 192 aaPredicted RBP5.47□□□□□ -1.53
SF1-217ENST00000486960 SMURF2Q9HAU4 748 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 TUFT1Q9NNX1 390 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 SEMA4BQ9NPR2 832 aaPredicted RBP5.47□□□□□ -1.53
SF1-217ENST00000486960 TDP1Q9NUW8 608 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 DNAJC11Q9NVH1 559 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 DNAJC17Q9NVM6 304 aaKnown RBP5.47□□□□□ -1.53
SF1-217ENST00000486960 DKK4Q9UBT3 224 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 GDAQ9Y2T3 454 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 LIPGQ9Y5X9 500 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 B3GALT1Q9Y5Z6 326 aa5.47□□□□□ -1.53
SF1-217ENST00000486960 FBN1P35555 2871 aaKnown RBP5.46□□□□□ -1.53
SF1-217ENST00000486960 C2orf92A0A1B0GVN3 265 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 ELOVL7A1L3X0 281 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 GOLGA8IPA6NC78 632 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 GAGE10A6NGK3 116 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 DDTLA6NHG4 134 aaPredicted RBP5.46□□□□□ -1.54
SF1-217ENST00000486960 A6NL46 340 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 FAM171A2A8MVW0 826 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 PCDH17O14917 1159 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 XPO1O14980 1071 aaKnown RBP5.46□□□□□ -1.54
SF1-217ENST00000486960 LSM1O15116 133 aaKnown RBP5.46□□□□□ -1.54
SF1-217ENST00000486960 ECI2O75521 394 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 SMNDC1O75940 238 aaKnown RBP eCLIP5.46□□□□□ -1.54
SF1-217ENST00000486960 MYO1DO94832 1006 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 TMCC1O94876 653 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 SERPINA3P01011 423 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 IGHEP01854 428 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 GBAP04062 536 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 AMY2AP04746 511 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 ALOX5P09917 674 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 PABPC4LP0CB38 370 aaKnown RBP5.46□□□□□ -1.54
SF1-217ENST00000486960 AMY2BP19961 511 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 MX1P20591 662 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 AGAP20933 346 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 KLRC1P26715 233 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 PPP1R2P41236 205 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 ALDH3B1P43353 468 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 KCNJ5P48544 419 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 HSPA13P48723 471 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 POU3F4P49335 361 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 ENTPD1P49961 510 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 MTTPP55157 894 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 TROAPQ12815 778 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 CSTF3Q12996 717 aaKnown RBP5.46□□□□□ -1.54
SF1-217ENST00000486960 IL11RAQ14626 422 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 RAB3GAP1Q15042 981 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 LPAL2Q16609 132 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 MAN2A1Q16706 1144 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 NRN1LQ496H8 165 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 BCL7AQ4VC05 210 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 TAF1BQ53T94 588 aaPredicted RBP5.46□□□□□ -1.54
SF1-217ENST00000486960 ZNF484Q5JVG2 852 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 SLFN13Q68D06 897 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 OR6B2Q6IFH4 312 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 PPP1R2P3Q6NXS1 205 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 CDC42EP5Q6NZY7 148 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 TMEM53Q6P2H8 277 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 HTR3DQ70Z44 454 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 CUZD1Q86UP6 607 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 IQCHQ86VS3 1027 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 LRRC6Q86X45 466 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 CCDC103Q8IW40 242 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 CCDC28AQ8IWP9 274 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 CCDC155Q8N6L0 562 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 ZNF366Q8N895 744 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 C12orf50Q8NA57 414 aaPredicted RBP5.46□□□□□ -1.54
SF1-217ENST00000486960 MCPH1Q8NEM0 835 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 VN1R2Q8NFZ6 395 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 ATP8B4Q8TF62 1192 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 WDR60Q8WVS4 1066 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 TSEN15Q8WW01 171 aaKnown RBP5.46□□□□□ -1.54
SF1-217ENST00000486960 SLC35B4Q969S0 331 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 HES6Q96HZ4 224 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 RBM41Q96IZ5 413 aaKnown RBP5.46□□□□□ -1.54
SF1-217ENST00000486960 SLC41A2Q96JW4 573 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 BTBD6Q96KE9 485 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 ZNF560Q96MR9 790 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 ALS2CR12Q96Q35 445 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 GAD1Q99259 594 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 RTP3Q9BQQ7 232 aa5.46□□□□□ -1.54
SF1-217ENST00000486960 DSCC1Q9BVC3 393 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms