RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ZNF510Q9Y2H8 683 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 TNFRSF10BO14763 440 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 SMAD6O43541 496 aaKnown RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 C1QTNF8P60827 252 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 MGAT3Q09327 533 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 SPIDRQ14159 915 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 MBTPS1Q14703 1052 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 C18orf21Q32NC0 220 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 PLEKHG6Q3KR16 790 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 SMYD5Q6GMV2 418 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 ANO7Q6IWH7 933 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 MBOAT1Q6ZNC8 495 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 FAM124AQ86V42 546 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 C7orf61Q8IZ16 206 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 LIX1Q8N485 282 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 KLK6Q92876 244 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 KIAA1191Q96A73 305 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 NUDT4Q9NZJ9 180 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 TRIP11Q15643 1979 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 LCHNA4D1U4 455 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 FTH1P02794 183 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 EPHX1P07099 455 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 CDH2P19022 906 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 NSG1P42857 185 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 LMAN2Q12907 356 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 MFSD4BQ5TF39 518 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 KCTD11Q693B1 232 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 Q6ZVL8 140 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 ARHGAP22Q7Z5H3 698 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 PTERQ96BW5 349 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 HEPHQ9BQS7 1158 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 BOCQ9BWV1 1114 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 MTG2Q9H4K7 406 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 RERGLQ9H628 205 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 ZNF556Q9HAH1 456 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 NLE1Q9NVX2 485 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 DUS2Q9NX74 493 aaKnown RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 DPP7Q9UHL4 492 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 KCNE2Q9Y6J6 123 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 LEFTY2O00292 366 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 CLDN9O95484 217 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 CREMQ03060 361 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 DSC1Q08554 894 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 OFCC1Q8IZS5 231 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 OR4F6Q8NGB9 312 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 OR10Q1Q8NGQ4 319 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 CXorf40AQ8TE69 158 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 SLC22A12Q96S37 553 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 UGT2B28Q9BY64 529 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 ADGRE2Q9UHX3 823 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 BLOC1S6Q9UL45 172 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 ABHD14A-ACY1A0A1B0GW23 586 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 H3BM21 787 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 SLC28A1O00337 649 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 GRID2O43424 1007 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 EPN2O95208 641 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 GSTT1P30711 240 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 PRKAG1P54619 331 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 SH3BP2P78314 561 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 SFT2D3Q587I9 215 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 NADSYN1Q6IA69 706 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 TMEM214Q6NUQ4 689 aaKnown RBP13.04□□□□□ -0.32
HMGN1-216ENST00000486741 TMEM220Q6QAJ8 160 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 SPATA19Q7Z5L4 167 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 PARP8Q8N3A8 854 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 KDM1BQ8NB78 822 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 TSPAN14Q8NG11 270 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 OR13J1Q8NGT2 312 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 UTP15Q8TED0 518 aaKnown RBP13.04□□□□□ -0.32
HMGN1-216ENST00000486741 TUBGCP5Q96RT8 1024 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 PKP2Q99959 881 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 ELAC1Q9H777 363 aaKnown RBP13.04□□□□□ -0.32
HMGN1-216ENST00000486741 LDB2O43679 373 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 CST1P01037 141 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 TYRP14679 529 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 HNF1BP35680 557 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 APLP1P51693 650 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 NTHL1P78549 312 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 OCA2Q04671 838 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 ZNF648Q5T619 568 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-216ENST00000486741 LYPLAL1Q5VWZ2 237 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 SLC2A7Q6PXP3 512 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 DPY19L3Q6ZPD9 716 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 METTL3Q86U44 580 aaKnown RBP13.04□□□□□ -0.32
HMGN1-216ENST00000486741 TSPAN33Q86UF1 283 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 FAM9CQ8IZT9 166 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 C12orf76Q8N812 135 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-216ENST00000486741 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 MRM3Q9HC36 420 aaKnown RBP13.04□□□□□ -0.32
HMGN1-216ENST00000486741 TDP1Q9NUW8 608 aa13.04□□□□□ -0.32
HMGN1-216ENST00000486741 GREB1LQ9C091 1923 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-216ENST00000486741 HLA-EP13747 358 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 ADSLP30566 484 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-216ENST00000486741 DGKGP49619 791 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 PRMT2P55345 433 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 CEACAM7Q14002 265 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 CARD16Q5EG05 197 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 BEND7Q8N7W2 519 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-216ENST00000486741 DCAF4L2Q8NA75 395 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 OR52B6Q8NGF0 335 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms